Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   RKV28_RS10140 Genome accession   NZ_CP134534
Coordinates   2036149..2036889 (-) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain KNIH_5618     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2031149..2041889
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RKV28_RS10115 hemH 2032025..2032948 (-) 924 WP_000162881.1 ferrochelatase -
  RKV28_RS10120 hemE 2033006..2034043 (-) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  RKV28_RS10125 - 2034033..2034143 (-) 111 WP_001790154.1 hypothetical protein -
  RKV28_RS10130 traP 2034306..2034809 (+) 504 WP_000737976.1 signal transduction protein TRAP -
  RKV28_RS10135 ecsB 2034933..2036156 (-) 1224 WP_000551836.1 ABC transporter permease EcsB -
  RKV28_RS10140 pptA 2036149..2036889 (-) 741 WP_000216874.1 ABC transporter ATP-binding protein EcsA Regulator
  RKV28_RS10145 - 2037023..2037445 (+) 423 WP_000004981.1 HIT family protein -
  RKV28_RS10150 - 2037587..2037952 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  RKV28_RS10155 - 2038687..2039244 (+) 558 WP_145367739.1 DUF3267 domain-containing protein -
  RKV28_RS10160 - 2039449..2040411 (+) 963 WP_000782121.1 foldase protein PrsA -
  RKV28_RS10165 yhaM 2040532..2041473 (-) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=804479 RKV28_RS10140 WP_000216874.1 2036149..2036889(-) (pptA) [Staphylococcus aureus strain KNIH_5618]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=804479 RKV28_RS10140 WP_000216874.1 2036149..2036889(-) (pptA) [Staphylococcus aureus strain KNIH_5618]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCATATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACATATAGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGACTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545