Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   RKV28_RS03450 Genome accession   NZ_CP134534
Coordinates   728816..729490 (+) Length   224 a.a.
NCBI ID   WP_001166500.1    Uniprot ID   Q99VW2
Organism   Staphylococcus aureus strain KNIH_5618     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 723816..734490
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RKV28_RS03425 - 724031..725098 (+) 1068 WP_000980137.1 membrane protein -
  RKV28_RS03430 - 725249..726292 (+) 1044 WP_001030775.1 alpha/beta hydrolase -
  RKV28_RS03435 - 726621..727049 (+) 429 WP_000198504.1 hypothetical protein -
  RKV28_RS03440 - 727258..727764 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  RKV28_RS03445 graX 727877..728800 (+) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  RKV28_RS03450 braR 728816..729490 (+) 675 WP_001166500.1 response regulator transcription factor GraR/ApsR Regulator
  RKV28_RS03455 graS 729483..730523 (+) 1041 WP_001061264.1 histidine kinase GraS/ApsS -
  RKV28_RS03460 vraF 730667..731428 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  RKV28_RS03465 vraG 731418..733307 (+) 1890 WP_000143615.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26065.87 Da        Isoelectric Point: 4.3563

>NTDB_id=804420 RKV28_RS03450 WP_001166500.1 728816..729490(+) (braR) [Staphylococcus aureus strain KNIH_5618]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=804420 RKV28_RS03450 WP_001166500.1 728816..729490(+) (braR) [Staphylococcus aureus strain KNIH_5618]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCTTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q99VW2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397