Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   RKV27_RS04400 Genome accession   NZ_CP134533
Coordinates   851476..852294 (+) Length   272 a.a.
NCBI ID   WP_001124423.1    Uniprot ID   -
Organism   Staphylococcus aureus strain KNIH_5844     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 846476..857294
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RKV27_RS04375 - 847095..847625 (+) 531 WP_000184383.1 acyl-CoA thioesterase -
  RKV27_RS04380 yfkAB 847885..849036 (-) 1152 WP_001089613.1 radical SAM/CxCxxxxC motif protein YfkAB -
  RKV27_RS04385 - 849260..849421 (+) 162 WP_001005407.1 SE1561 family protein -
  RKV27_RS04390 - 849552..850067 (+) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  RKV27_RS04395 sgtB 850406..851215 (+) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  RKV27_RS04400 recX 851476..852294 (+) 819 WP_001124423.1 recombination regulator RecX Regulator
  RKV27_RS04405 - 852272..852586 (+) 315 WP_000435806.1 YfhH family protein -
  RKV27_RS04410 - 852601..854118 (+) 1518 WP_000535834.1 ABC transporter ATP-binding protein -
  RKV27_RS04415 - 854127..854963 (+) 837 WP_000886456.1 hypothetical protein -
  RKV27_RS04420 - 855224..856201 (-) 978 WP_311163190.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32245.07 Da        Isoelectric Point: 5.9211

>NTDB_id=804336 RKV27_RS04400 WP_001124423.1 851476..852294(+) (recX) [Staphylococcus aureus strain KNIH_5844]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEGVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=804336 RKV27_RS04400 WP_001124423.1 851476..852294(+) (recX) [Staphylococcus aureus strain KNIH_5844]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAACAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAGAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGGGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.265

100

0.993