Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   RKV26_RS03470 Genome accession   NZ_CP134532
Coordinates   696000..696674 (+) Length   224 a.a.
NCBI ID   WP_001166505.1    Uniprot ID   Q2FIY0
Organism   Staphylococcus aureus strain KNIH_6268     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 691000..701674
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RKV26_RS03445 - 691215..692282 (+) 1068 WP_000980142.1 membrane protein -
  RKV26_RS03450 - 692433..693476 (+) 1044 WP_154283738.1 alpha/beta hydrolase -
  RKV26_RS03455 - 693805..694233 (+) 429 WP_000198495.1 hypothetical protein -
  RKV26_RS03460 - 694442..694948 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  RKV26_RS03465 graX 695061..695984 (+) 924 WP_154283739.1 auxiliary protein GraX/ApsX -
  RKV26_RS03470 braR 696000..696674 (+) 675 WP_001166505.1 response regulator transcription factor GraR/ApsR Regulator
  RKV26_RS03475 graS 696667..697707 (+) 1041 WP_154283740.1 histidine kinase GraS/ApsS -
  RKV26_RS03480 vraF 697854..698615 (+) 762 WP_209205765.1 ABC transporter ATP-binding protein VraF -
  RKV26_RS03485 - 698605..700494 (+) 1890 WP_154283741.1 FtsX-like permease family protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26078.92 Da        Isoelectric Point: 4.3968

>NTDB_id=804245 RKV26_RS03470 WP_001166505.1 696000..696674(+) (braR) [Staphylococcus aureus strain KNIH_6268]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=804245 RKV26_RS03470 WP_001166505.1 696000..696674(+) (braR) [Staphylococcus aureus strain KNIH_6268]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTCTTATCATCTCGT
GACAACCCGATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGACAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCTAAAACAGAAATGATTATTTTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2FIY0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402