Detailed information NTG0080418

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: L6436_RS26140
• Genome accession: NZ_AP022978
• Coordinates: 5009518..5010867 (-)
• Length: 449 a.a.
• NCBI ID: WP_236787299.1
• Uniprot ID: -
• Organism: Bacillus cereus strain 30043
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5004518..5015867

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6436_RS26120 (BC30043_5164)	secA	5004840..5007347 (-)	2508	WP_000579368.1	preprotein translocase subunit SecA	-
L6436_RS26125 (BC30043_5165)	raiA	5007624..5008166 (-)	543	WP_000671189.1	ribosome-associated translation inhibitor RaiA	-
L6436_RS26130 (BC30043_5166)	cspC	5008490..5008687 (-)	198	WP_033656419.1	cold shock protein CspC	-
L6436_RS26135 (BC30043_5167)	comFC	5008814..5009518 (-)	705	WP_062921932.1	comF operon protein ComFC	-
L6436_RS26140 (BC30043_5168)	comFA	5009518..5010867 (-)	1350	WP_236787299.1	ATP-dependent helicase ComFA	Machinery gene
L6436_RS26145 (BC30043_5169)	-	5010995..5012423 (-)	1429	Protein_5108	NlpC/P60 family protein	-
L6436_RS26150 (BC30043_5170)	-	5012571..5012885 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
L6436_RS26155 (BC30043_5171)	-	5013059..5013901 (-)	843	WP_236787300.1	DegV family protein	-
L6436_RS26160 (BC30043_5172)	-	5014141..5014776 (+)	636	WP_000926685.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51305.95 Da
• Isoelectric Point: 9.5085

>NTDB_id=80418 L6436_RS26140 WP_236787299.1 5009518..5010867(-) (comFA) [Bacillus cereus strain 30043]
MVAGKQLLLEELPSDLRRELSDLKKEGEVICVQGVIKKASKYICQRCGNIEQRLFASFLCKRCSKVCTYCRKCITMGRVS
ECAVLVRGIHERKGERELHSLQWKGSLSLGQELAAQGIIEAIKQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELVPRLQEVFPSINVAALYGGSVDREKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVQQAM
KERAARIYLTATPDEKWKRNFRTGKQKGIIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMYVNKKYPIFL
FVPHVRYIEEISLLLKELDHRIDGVHAEDPMRKEKVAAFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVVYFHYGKTESMVRAKRHIQSMNKSAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=80418 L6436_RS26140 WP_236787299.1 5009518..5010867(-) (comFA) [Bacillus cereus strain 30043]
ATGGTTGCTGGAAAGCAGTTACTATTAGAAGAACTCCCTTCAGATTTACGGAGAGAATTAAGTGATTTGAAAAAGGAGGG
AGAGGTCATATGTGTACAAGGTGTAATAAAGAAGGCTTCTAAATATATATGTCAGCGCTGCGGGAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCAGTAAAGTATGTACGTATTGCCGGAAGTGTATAACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGCGGGATTCATGAAAGAAAAGGAGAAAGGGAATTACATTCGTTACAGTGGAAAGGGAGTTT
GTCTCTTGGTCAGGAGCTGGCGGCGCAAGGTATTATAGAAGCTATTAAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCACTTCAAAAAGGAGAAAGAGTGTGTATCGCAACG
CCAAGGACGGACGTTGTACTGGAATTAGTACCGAGATTACAAGAAGTGTTTCCAAGTATAAATGTAGCTGCTTTATACGG
AGGGAGTGTAGATCGTGAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCATTTC
ATGTGATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTGCAGCAAGCGATG
AAAGAGAGAGCGGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAGTGGAAGCGCAATTTCAGAACGGGGAAACAAAA
AGGTATCATTGTCTCTGGACGATACCATCGTCATCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGTAATTGGAAGAAAA
GCCTTCACCATAAAAAAATTCCTCGTGTGTTACTACAATGGTTAAAAATGTACGTAAACAAAAAATACCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATAAGCCTGTTATTGAAAGAGTTGGATCATAGAATCGATGGCGTACATGC
AGAAGATCCGATGAGAAAAGAAAAAGTGGCAGCGTTTAGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGGGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGGGCTGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCAGGCCGAGCAGGTCGTAGTTTTGAAGAACCGTATGGTGAGGTTGTTTATTTTCATTACGGTAAGACAGAGTC
GATGGTACGTGCGAAAAGACATATTCAAAGTATGAACAAAAGTGCGAAAGAACAAGGATTAATTGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (312-408)

• Type III restriction enzyme, res subunit (ResIII) (108-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	51.675	93.096	0.481