Detailed information NTG0803996

Bioinformatically predicted

Overview

• Name: ceuB
• Type: Machinery gene
• Locus tag: P3T89_RS11385
• Genome accession: NZ_CP120166
• Coordinates: 2258074..2259045 (-)
• Length: 323 a.a.
• NCBI ID: WP_025905417.1
• Uniprot ID: A0AAJ4SJJ8
• Organism: Mammaliicoccus sciuri strain Dog024_1
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	2259737..2269239	2258074..2259045	flank	692

Gene organization within MGE regions

Location: 2258074..2269239

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P3T89_RS11385 (P3T89_11385)	ceuB	2258074..2259045 (-)	972	WP_025905417.1	ABC transporter permease	Machinery gene
P3T89_RS11390 (P3T89_11390)	-	2259171..2259587 (-)	417	WP_058612032.1	FixH family protein	-
P3T89_RS11395 (P3T89_11395)	nrdF	2259737..2260708 (-)	972	WP_048539937.1	class 1b ribonucleoside-diphosphate reductase subunit beta	-
P3T89_RS11400 (P3T89_11400)	nrdE	2260737..2262842 (-)	2106	WP_058612033.1	class 1b ribonucleoside-diphosphate reductase subunit alpha	-
P3T89_RS11405 (P3T89_11405)	nrdI	2262805..2263203 (-)	399	WP_025905413.1	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	-
P3T89_RS11410 (P3T89_11410)	-	2263578..2264462 (+)	885	WP_048539939.1	DMT family transporter	-
P3T89_RS11415 (P3T89_11415)	queF	2264462..2264962 (+)	501	WP_048539940.1	preQ(1) synthase	-
P3T89_RS11420 (P3T89_11420)	-	2265256..2266770 (+)	1515	WP_048539941.1	peptide MFS transporter	-
P3T89_RS11425 (P3T89_11425)	-	2267116..2268618 (+)	1503	WP_048539942.1	peptide MFS transporter	-
P3T89_RS11430 (P3T89_11430)	-	2268658..2269239 (-)	582	WP_048539943.1	5' nucleotidase, NT5C type	-

Sequence

Protein

• Length: 323 a.a.
• Molecular weight: 35476.97 Da
• Isoelectric Point: 10.7243

>NTDB_id=803996 P3T89_RS11385 WP_025905417.1 2258074..2259045(-) (ceuB) [Mammaliicoccus sciuri strain Dog024_1]
MGKFLMRLDVLIILLVIATFFSIFIGVSEVKPLHILNLTDEQKNILVSSRIPRTVSIIISGSSLAICGLIMQQLTRNKFV
SPTTAGTMDWARLGILISLIAFPEANILLKLLFATLLSLFGTMLFMQILRRIQFKDVIFIPLVGIMLGNIVSSFSSFVAL
RTNAVQSIGNFMQGNFSIITSGRYEILYISIPLLILAFIFANQFTIAGMGKDFSVNLGLNYQKVVNIGLIIASIITALVV
VTVGMMPFLGLIIPNLVSIFRGDHLKNALPHTAVFGALFVMICDVIGRLIIFPYEITIGLTIGVIGSFIFIVLLMKGRSR
NAQ

Nucleotide

• Length: 972 bp

>NTDB_id=803996 P3T89_RS11385 WP_025905417.1 2258074..2259045(-) (ceuB) [Mammaliicoccus sciuri strain Dog024_1]
ATGGGAAAGTTTTTAATGCGTTTAGATGTTTTGATTATTTTATTAGTAATTGCAACGTTCTTCTCTATATTTATAGGTGT
TTCAGAAGTAAAACCATTACATATATTAAATTTAACAGACGAACAGAAGAACATTTTAGTATCAAGTAGAATTCCAAGAA
CAGTCAGTATTATTATTTCAGGTAGCTCGTTAGCTATTTGTGGACTGATTATGCAACAGCTTACAAGAAATAAATTCGTT
TCTCCAACAACTGCAGGGACAATGGATTGGGCCAGATTAGGTATATTAATTTCTCTTATCGCTTTTCCAGAAGCCAACAT
ACTACTTAAATTATTATTTGCTACATTATTAAGTTTATTTGGAACAATGCTATTCATGCAAATTCTCCGTAGAATTCAAT
TTAAAGATGTTATTTTTATACCATTAGTTGGTATTATGCTCGGAAACATAGTGTCAAGTTTTTCATCTTTTGTTGCATTA
CGTACAAATGCTGTACAAAGTATTGGTAATTTTATGCAAGGTAATTTCTCAATTATTACAAGCGGTAGATATGAAATTCT
TTATATTAGTATTCCGTTATTGATTTTAGCATTTATATTTGCGAATCAATTTACGATTGCTGGTATGGGTAAAGATTTTA
GTGTGAATTTAGGACTTAATTATCAAAAAGTCGTCAATATCGGACTGATTATTGCCTCAATCATTACGGCACTTGTTGTT
GTAACAGTTGGTATGATGCCATTCTTAGGTTTAATTATTCCTAACTTAGTTTCAATATTCAGAGGAGATCATTTAAAAAA
TGCATTGCCGCATACAGCTGTATTTGGTGCATTGTTTGTTATGATTTGTGATGTAATAGGTCGATTAATTATATTCCCTT
ATGAAATTACAATTGGTTTAACAATTGGTGTGATTGGTAGTTTCATATTTATAGTATTGCTGATGAAAGGACGTTCAAGA
AATGCTCAATAA

Domains

Predicted by InterproScan.

• FecCD transport family (FecCD) (14-316)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ceuB	Campylobacter jejuni subsp. jejuni 81-176	51.104	98.142	0.502