Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | L6436_RS10000 | Genome accession | NZ_AP022978 |
| Coordinates | 1949026..1949313 (+) | Length | 95 a.a. |
| NCBI ID | WP_000648330.1 | Uniprot ID | A0AAE9P9A9 |
| Organism | Bacillus cereus strain 30043 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1944026..1954313
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6436_RS09980 (BC30043_1905) | - | 1945200..1945397 (+) | 198 | WP_062921548.1 | DUF4083 domain-containing protein | - |
| L6436_RS09985 (BC30043_1906) | - | 1945429..1945890 (+) | 462 | WP_000035009.1 | NUDIX hydrolase | - |
| L6436_RS09990 (BC30043_1907) | nadE | 1945939..1946757 (-) | 819 | WP_062921549.1 | ammonia-dependent NAD(+) synthetase | - |
| L6436_RS09995 (BC30043_1908) | - | 1947029..1948909 (+) | 1881 | WP_236788246.1 | ABC transporter permease | - |
| L6436_RS10000 (BC30043_1909) | abrB | 1949026..1949313 (+) | 288 | WP_000648330.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| L6436_RS10005 (BC30043_1910) | - | 1949588..1950538 (+) | 951 | WP_001089035.1 | serine protease | - |
| L6436_RS10010 (BC30043_1911) | - | 1950579..1950887 (-) | 309 | WP_001259894.1 | helix-turn-helix transcriptional regulator | - |
| L6436_RS10015 (BC30043_1912) | - | 1950995..1951930 (+) | 936 | WP_062921551.1 | aldo/keto reductase | - |
| L6436_RS10020 (BC30043_1913) | - | 1951979..1953154 (+) | 1176 | WP_062921552.1 | MFS transporter | - |
| L6436_RS10025 (BC30043_1914) | - | 1953344..1953568 (-) | 225 | WP_000162606.1 | hypothetical protein | - |
| L6436_RS10030 (BC30043_1915) | - | 1953653..1954000 (-) | 348 | WP_000426313.1 | DUF4257 domain-containing protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10617.34 Da Isoelectric Point: 6.3179
>NTDB_id=80396 L6436_RS10000 WP_000648330.1 1949026..1949313(+) (abrB) [Bacillus cereus strain 30043]
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSNQNISLANGNITVSIDGAK
YLIKEIEKFLNKSEA
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSNQNISLANGNITVSIDGAK
YLIKEIEKFLNKSEA
Nucleotide
Download Length: 288 bp
>NTDB_id=80396 L6436_RS10000 WP_000648330.1 1949026..1949313(+) (abrB) [Bacillus cereus strain 30043]
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAATTACGTGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTCGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAAATCAAAACATATCATTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
TATTTAATAAAAGAAATAGAGAAGTTTTTAAACAAGAGTGAGGCTTAG
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAATTACGTGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTCGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAAATCAAAACATATCATTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
TATTTAATAAAAGAAATAGAGAAGTTTTTAAACAAGAGTGAGGCTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
54.444 |
94.737 |
0.516 |