Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   RJW49_RS04940 Genome accession   NZ_CP134477
Coordinates   941974..942456 (-) Length   160 a.a.
NCBI ID   WP_012028247.1    Uniprot ID   A0A0H3MUQ1
Organism   Streptococcus suis strain NLS40     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 936974..947456
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RJW49_RS04915 (RJW49_04915) pheT 937283..939682 (+) 2400 WP_014735762.1 phenylalanine--tRNA ligase subunit beta -
  RJW49_RS04920 (RJW49_04920) - 939737..940003 (+) 267 WP_012775169.1 DUF2087 domain-containing protein -
  RJW49_RS04925 (RJW49_04925) - 940024..940326 (-) 303 WP_014735764.1 hypothetical protein -
  RJW49_RS04930 (RJW49_04930) - 940519..941262 (+) 744 WP_014735765.1 polyphosphate polymerase domain-containing protein -
  RJW49_RS04935 (RJW49_04935) - 941249..941926 (+) 678 WP_012027115.1 DUF4956 domain-containing protein -
  RJW49_RS04940 (RJW49_04940) mutX 941974..942456 (-) 483 WP_012028247.1 8-oxo-dGTP diphosphatase Machinery gene
  RJW49_RS04945 (RJW49_04945) folE 942624..943187 (+) 564 WP_002938082.1 GTP cyclohydrolase I FolE -
  RJW49_RS04950 (RJW49_04950) folP 943196..944008 (+) 813 WP_002938084.1 dihydropteroate synthase -
  RJW49_RS04955 (RJW49_04955) folB 944001..944363 (+) 363 WP_014735766.1 dihydroneopterin aldolase -
  RJW49_RS04960 (RJW49_04960) folK 944360..944848 (+) 489 WP_074393728.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  RJW49_RS04965 (RJW49_04965) - 944899..946209 (+) 1311 WP_012775168.1 GntP family permease -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18554.91 Da        Isoelectric Point: 4.4960

>NTDB_id=803903 RJW49_RS04940 WP_012028247.1 941974..942456(-) (mutX) [Streptococcus suis strain NLS40]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREIFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGSLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLEDKPFFSACFRYDGDKLLDYSVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=803903 RJW49_RS04940 WP_012028247.1 941974..942456(-) (mutX) [Streptococcus suis strain NLS40]
ATGACCAAGAAACCTGTCCAACTGGCTACGATTTGCTACATTGATAATGGCAAAGAATTTCTCCTGCTCCATCGCAATAA
AAAAGAAAACGATGTCCACCAGGGGAAATGGATTGGGGTCGGTGGTAAGCTGGAACCCGGTGAAACACCGCAGGCTTGTG
CCATTCGAGAAATCTTTGAGGAAACTGGGCTTACTGTAACGAAGCATGCTCTAAAAGGAGTGATAACCTTCCCAGACTTT
ACTCCAAACACTGACTGGTACACCTATGTCTTTAAGATAACTGGTTTTGAAGGAAGTCTTATTGACTGCAATGAAGGTGA
CTTAGAGTGGGTTCCCTATGACCAAGTCTTGTCCAAACCAACTTGGGAGGGCGACCGGCATTTTCAAGAATGGCTATTAG
AGGACAAACCATTTTTTTCCGCTTGCTTCCGCTATGATGGGGACAAATTGCTTGATTATAGCGTTGATTTTTATGAAGAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MUQ1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

81.699

95.625

0.781