Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   P3U54_RS11205 Genome accession   NZ_CP120155
Coordinates   2265321..2266289 (-) Length   322 a.a.
NCBI ID   WP_017000362.1    Uniprot ID   A0AAX3W5Q2
Organism   Mammaliicoccus lentus strain Dog026     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2260321..2271289
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3U54_RS11180 (P3U54_11180) - 2260737..2261258 (+) 522 WP_064210890.1 GrpB family protein -
  P3U54_RS11185 (P3U54_11185) murB 2261329..2262258 (+) 930 WP_064210869.1 UDP-N-acetylmuramate dehydrogenase -
  P3U54_RS11190 (P3U54_11190) - 2262422..2263462 (-) 1041 WP_064204702.1 ferrated catecholamine ABC transporter substrate-binding lipoprotein SstD -
  P3U54_RS11195 (P3U54_11195) - 2263566..2264366 (-) 801 WP_064210867.1 ABC transporter ATP-binding protein -
  P3U54_RS11200 (P3U54_11200) - 2264363..2265328 (-) 966 WP_064204700.1 iron chelate uptake ABC transporter family permease subunit -
  P3U54_RS11205 (P3U54_11205) ceuB 2265321..2266289 (-) 969 WP_017000362.1 ABC transporter permease Machinery gene
  P3U54_RS11210 (P3U54_11210) - 2266414..2266842 (-) 429 WP_323710629.1 FixH family protein -
  P3U54_RS11215 (P3U54_11215) nrdF 2267096..2268067 (-) 972 WP_064204699.1 class 1b ribonucleoside-diphosphate reductase subunit beta -
  P3U54_RS11220 (P3U54_11220) nrdE 2268095..2270200 (-) 2106 WP_017000365.1 class 1b ribonucleoside-diphosphate reductase subunit alpha -
  P3U54_RS11225 (P3U54_11225) nrdI 2270172..2270561 (-) 390 WP_017000366.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35426.02 Da        Isoelectric Point: 10.4592

>NTDB_id=803892 P3U54_RS11205 WP_017000362.1 2265321..2266289(-) (ceuB) [Mammaliicoccus lentus strain Dog026]
MGKFLMRLDVLIVLLVIATFFSIFIGVSEVRPLQILSLTDEQKNILVSSRIPRTVSIIISGSCLAICGLIMQQLTRNKFV
SPTTAGTMDWAKLGVLISLILFPDTNILFKLLFATLLSLFGTMLFMQILQRIQFKDVIFIPLVGIMLGNIVSSFSTFVAL
RTNAVQSIGNFMQGNFSIITSGRYEILYISIPLLIIAYIFANKFTIAGMGKDFSVNLGLNYHRIVNIGLIIASIITALVV
VTVGMMPFLGLIIPNLISIFRGDHLKNALPHTAILGALFVMICDILGRLIIFPYEITIGLTIGVIGSFIFIVLLMKGRSK
NA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=803892 P3U54_RS11205 WP_017000362.1 2265321..2266289(-) (ceuB) [Mammaliicoccus lentus strain Dog026]
ATGGGAAAGTTTTTAATGCGTTTAGATGTATTGATTGTATTATTAGTTATCGCAACATTCTTCTCAATATTTATTGGCGT
TTCAGAAGTGAGACCTTTACAAATATTAAGTCTCACAGATGAACAGAAAAATATACTAGTATCTAGTAGAATTCCTAGAA
CGGTTAGTATTATTATTTCAGGAAGTTGTTTAGCAATATGCGGTCTGATTATGCAACAGTTAACGAGAAATAAATTTGTT
TCTCCAACAACAGCAGGCACGATGGATTGGGCAAAGTTAGGTGTTTTAATTTCACTGATACTATTTCCAGACACGAATAT
ATTATTTAAACTTTTATTCGCAACATTACTAAGTTTATTTGGAACAATGTTATTCATGCAAATCCTACAAAGAATTCAAT
TCAAAGATGTTATTTTTATACCACTTGTAGGGATAATGCTTGGTAACATTGTTTCTAGTTTTTCAACCTTTGTTGCTTTA
AGAACAAACGCTGTTCAAAGCATAGGGAACTTTATGCAAGGTAACTTTTCTATCATTACTAGTGGGCGATACGAAATTTT
ATACATAAGTATTCCTTTATTGATAATTGCGTATATTTTTGCCAACAAATTTACGATTGCAGGTATGGGAAAGGACTTCA
GTGTCAACTTAGGATTAAATTACCATAGAATAGTTAATATTGGTTTAATCATTGCATCTATCATTACAGCACTAGTTGTT
GTAACAGTAGGAATGATGCCTTTCTTAGGATTAATTATACCGAACTTAATTTCAATATTCAGAGGTGATCATCTTAAAAA
TGCTTTACCGCACACTGCAATCTTAGGCGCGTTGTTTGTTATGATATGCGACATTTTAGGAAGACTGATTATATTCCCAT
ACGAAATTACAATTGGTTTAACAATCGGTGTAATTGGTAGCTTTATTTTCATAGTTTTATTGATGAAAGGACGTTCGAAA
AATGCTTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(14-316)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.473

98.447

0.497