Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   RJW49_RS02205 Genome accession   NZ_CP134477
Coordinates   429557..430333 (+) Length   258 a.a.
NCBI ID   WP_074393347.1    Uniprot ID   -
Organism   Streptococcus suis strain NLS40     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 424557..435333
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RJW49_RS02195 (RJW49_02195) - 426452..427708 (-) 1257 WP_138083577.1 ISL3 family transposase -
  RJW49_RS02200 (RJW49_02200) rlmD 428167..429519 (-) 1353 WP_014735518.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  RJW49_RS02205 (RJW49_02205) recX 429557..430333 (+) 777 WP_074393347.1 recombination regulator RecX Regulator
  RJW49_RS02210 (RJW49_02210) - 430409..430942 (+) 534 WP_004194106.1 DUF402 domain-containing protein -
  RJW49_RS02215 (RJW49_02215) - 431000..431317 (+) 318 WP_004194104.1 DUF960 domain-containing protein -
  RJW49_RS02220 (RJW49_02220) - 431417..432148 (+) 732 WP_014735520.1 GntR family transcriptional regulator -
  RJW49_RS02225 (RJW49_02225) - 432288..432998 (-) 711 WP_014637542.1 GntR family transcriptional regulator -
  RJW49_RS02230 (RJW49_02230) - 433205..434977 (+) 1773 WP_074393346.1 beta-galactosidase family protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30529.15 Da        Isoelectric Point: 9.3979

>NTDB_id=803891 RJW49_RS02205 WP_074393347.1 429557..430333(+) (recX) [Streptococcus suis strain NLS40]
MRITKIEKKKRLYLLEVDGQDSLYITEDTIVRFMLSKGKEITEQEFRELRDFAQFSYGKNLALYYLSFKQRTKKEVSDYL
KKYEIEENNIVKIVTVLEEEKWLDDGNYVDSYVRQNALNGDKGPAMIRQKLMQKGIPKPLIDKRLAEEDFSELARKIGEK
LVGRYQRKLPLRALQDKVVQGLMGKGFSYEMAKQSLGQLELVADEENEDDLIAKELDKQYRKYSRKYEGYELKQRLIQAL
ARKGYDFDRIQAVLRDYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=803891 RJW49_RS02205 WP_074393347.1 429557..430333(+) (recX) [Streptococcus suis strain NLS40]
ATGAGAATTACAAAAATTGAAAAGAAGAAACGTCTTTATTTACTTGAAGTGGATGGTCAGGATAGTTTATATATTACGGA
AGACACAATTGTTCGCTTCATGCTTAGTAAGGGAAAGGAAATCACGGAGCAGGAGTTTCGTGAGCTTCGCGATTTTGCTC
AGTTTTCTTATGGGAAAAATCTAGCACTTTATTACCTTTCCTTCAAGCAACGTACCAAAAAAGAAGTTAGTGATTATCTA
AAAAAATATGAAATTGAAGAAAACAATATTGTCAAGATAGTGACGGTATTAGAAGAGGAAAAATGGCTGGACGATGGGAA
TTATGTTGATAGCTATGTTCGTCAGAATGCTCTAAATGGAGATAAGGGACCAGCTATGATTCGTCAGAAGTTGATGCAGA
AAGGAATTCCTAAACCGCTGATTGATAAAAGGCTGGCAGAGGAAGATTTTTCAGAGCTTGCTAGGAAGATTGGGGAGAAA
TTGGTGGGTAGATACCAAAGAAAATTGCCTCTTCGAGCTTTGCAAGATAAAGTTGTACAGGGATTGATGGGTAAGGGGTT
TTCTTATGAGATGGCCAAACAAAGCCTGGGTCAGTTGGAACTTGTGGCTGATGAGGAAAATGAAGATGATTTAATTGCCA
AGGAACTGGACAAGCAGTATAGAAAATATAGTCGTAAATATGAAGGTTACGAATTGAAGCAAAGGTTGATACAGGCTTTG
GCTCGAAAGGGTTATGACTTTGATCGGATTCAGGCTGTCCTTCGTGATTATCTGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

35.581

100

0.368