Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | P3U10_RS07105 | Genome accession | NZ_CP120147 |
| Coordinates | 1389823..1390725 (+) | Length | 300 a.a. |
| NCBI ID | WP_323708467.1 | Uniprot ID | - |
| Organism | Mammaliicoccus sciuri strain Dog030 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1384823..1395725
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P3U10_RS07065 (P3U10_07060) | - | 1384907..1385461 (+) | 555 | WP_058611616.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| P3U10_RS07070 (P3U10_07065) | - | 1385462..1386910 (+) | 1449 | WP_323708465.1 | rhomboid family intramembrane serine protease | - |
| P3U10_RS07075 (P3U10_07070) | - | 1386915..1387106 (+) | 192 | WP_078099923.1 | YqgQ family protein | - |
| P3U10_RS07080 (P3U10_07075) | - | 1387103..1388074 (+) | 972 | WP_135016726.1 | ROK family glucokinase | - |
| P3U10_RS07085 (P3U10_07080) | - | 1388074..1388388 (+) | 315 | WP_323708466.1 | MTH1187 family thiamine-binding protein | - |
| P3U10_RS07090 (P3U10_07085) | - | 1388418..1388657 (-) | 240 | WP_016911885.1 | DUF2759 domain-containing protein | - |
| P3U10_RS07095 (P3U10_07090) | - | 1388755..1389387 (+) | 633 | WP_058611613.1 | MBL fold metallo-hydrolase | - |
| P3U10_RS07100 (P3U10_07095) | - | 1389421..1389669 (-) | 249 | WP_025904960.1 | DUF2626 family protein | - |
| P3U10_RS07105 (P3U10_07100) | comGA | 1389823..1390725 (+) | 903 | WP_323708467.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| P3U10_RS07110 (P3U10_07105) | comGB | 1390715..1391755 (+) | 1041 | WP_323708468.1 | competence type IV pilus assembly protein ComGB | - |
| P3U10_RS07115 (P3U10_07110) | comGC | 1391770..1392087 (+) | 318 | WP_058611611.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| P3U10_RS07120 (P3U10_07115) | - | 1392116..1392514 (+) | 399 | WP_049319406.1 | hypothetical protein | - |
| P3U10_RS07125 (P3U10_07120) | comGE | 1392498..1392779 (+) | 282 | WP_058611610.1 | competence type IV pilus minor pilin ComGE | - |
| P3U10_RS07130 (P3U10_07125) | - | 1392754..1393188 (+) | 435 | WP_049318781.1 | competence type IV pilus minor pilin ComGF | - |
| P3U10_RS07135 (P3U10_07130) | - | 1393423..1393911 (+) | 489 | WP_135016732.1 | shikimate kinase | - |
| P3U10_RS07140 (P3U10_07135) | gcvT | 1394104..1395192 (+) | 1089 | WP_243476862.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 300 a.a. Molecular weight: 34390.33 Da Isoelectric Point: 6.1198
>NTDB_id=803744 P3U10_RS07105 WP_323708467.1 1389823..1390725(+) (comGA) [Mammaliicoccus sciuri strain Dog030]
MEKLFKSIINDAVNSNASDIHFVPLNDDKVFVQMRINGDNIPYDLDLDFNLYSRLLIYMKFIAHLDVSERNKAQSGLYLF
EHDIHYYLRISTIPISLGIESSSIRITPQHFNHSQVKSEHQSYNVLQNRMYQSEGLFLFTGPTGSGKTTLMYELMYALKR
EKNKHIITIEDPVEQTLNGIVQVSVNEKANITYQQSFKAILRCDPDVIMIGEIRDDITAKQVIQASLSGHLVLSTMHASD
TIGAIHRLVELGVTVEQIKQGISCITNQRLVKKCDEARTLDMSYIFKDDIIKYMENDYET
MEKLFKSIINDAVNSNASDIHFVPLNDDKVFVQMRINGDNIPYDLDLDFNLYSRLLIYMKFIAHLDVSERNKAQSGLYLF
EHDIHYYLRISTIPISLGIESSSIRITPQHFNHSQVKSEHQSYNVLQNRMYQSEGLFLFTGPTGSGKTTLMYELMYALKR
EKNKHIITIEDPVEQTLNGIVQVSVNEKANITYQQSFKAILRCDPDVIMIGEIRDDITAKQVIQASLSGHLVLSTMHASD
TIGAIHRLVELGVTVEQIKQGISCITNQRLVKKCDEARTLDMSYIFKDDIIKYMENDYET
Nucleotide
Download Length: 903 bp
>NTDB_id=803744 P3U10_RS07105 WP_323708467.1 1389823..1390725(+) (comGA) [Mammaliicoccus sciuri strain Dog030]
ATGGAGAAATTATTTAAGTCAATTATTAACGATGCTGTCAATTCTAATGCGAGTGATATTCATTTTGTACCTTTAAACGA
TGATAAAGTCTTTGTCCAAATGAGGATAAATGGCGATAATATACCTTATGATTTAGATTTAGACTTTAATTTGTATAGTA
GGCTACTTATTTATATGAAATTTATCGCTCATCTAGATGTAAGTGAACGAAATAAAGCACAAAGTGGTCTATATTTATTT
GAACATGACATACATTACTATTTAAGAATTTCCACGATACCTATCAGTTTAGGGATAGAATCTAGTTCCATTAGAATAAC
CCCTCAACATTTTAATCATTCACAAGTGAAATCAGAGCATCAATCATATAACGTTCTACAAAACAGAATGTATCAATCAG
AAGGGCTATTTTTATTTACGGGTCCAACTGGATCAGGTAAGACTACATTAATGTATGAACTTATGTACGCATTAAAGAGA
GAGAAGAATAAACATATTATTACGATTGAAGACCCTGTAGAACAAACGTTAAATGGCATCGTTCAAGTTTCAGTCAATGA
AAAAGCTAACATAACTTATCAACAATCCTTTAAAGCCATTTTAAGATGTGATCCGGACGTTATTATGATTGGAGAGATAA
GAGATGATATTACTGCTAAGCAAGTTATTCAAGCTAGTTTAAGTGGTCATTTAGTACTTTCAACAATGCATGCGAGTGAT
ACAATCGGGGCAATCCACCGACTAGTTGAGCTAGGTGTAACAGTCGAACAAATTAAACAAGGTATTTCATGTATTACGAA
CCAACGTCTTGTGAAGAAATGTGATGAAGCAAGAACATTAGATATGTCCTATATTTTTAAAGATGACATTATTAAATATA
TGGAGAATGATTATGAAACGTAA
ATGGAGAAATTATTTAAGTCAATTATTAACGATGCTGTCAATTCTAATGCGAGTGATATTCATTTTGTACCTTTAAACGA
TGATAAAGTCTTTGTCCAAATGAGGATAAATGGCGATAATATACCTTATGATTTAGATTTAGACTTTAATTTGTATAGTA
GGCTACTTATTTATATGAAATTTATCGCTCATCTAGATGTAAGTGAACGAAATAAAGCACAAAGTGGTCTATATTTATTT
GAACATGACATACATTACTATTTAAGAATTTCCACGATACCTATCAGTTTAGGGATAGAATCTAGTTCCATTAGAATAAC
CCCTCAACATTTTAATCATTCACAAGTGAAATCAGAGCATCAATCATATAACGTTCTACAAAACAGAATGTATCAATCAG
AAGGGCTATTTTTATTTACGGGTCCAACTGGATCAGGTAAGACTACATTAATGTATGAACTTATGTACGCATTAAAGAGA
GAGAAGAATAAACATATTATTACGATTGAAGACCCTGTAGAACAAACGTTAAATGGCATCGTTCAAGTTTCAGTCAATGA
AAAAGCTAACATAACTTATCAACAATCCTTTAAAGCCATTTTAAGATGTGATCCGGACGTTATTATGATTGGAGAGATAA
GAGATGATATTACTGCTAAGCAAGTTATTCAAGCTAGTTTAAGTGGTCATTTAGTACTTTCAACAATGCATGCGAGTGAT
ACAATCGGGGCAATCCACCGACTAGTTGAGCTAGGTGTAACAGTCGAACAAATTAAACAAGGTATTTCATGTATTACGAA
CCAACGTCTTGTGAAGAAATGTGATGAAGCAAGAACATTAGATATGTCCTATATTTTTAAAGATGACATTATTAAATATA
TGGAGAATGATTATGAAACGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
52.143 |
93.333 |
0.487 |
| comGA | Staphylococcus aureus N315 |
52.143 |
93.333 |
0.487 |
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
40.942 |
92 |
0.377 |
| pilB | Haemophilus influenzae Rd KW20 |
35.032 |
100 |
0.367 |