Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   L6438_RS19980 Genome accession   NZ_AP022975
Coordinates   3868180..3868638 (+) Length   152 a.a.
NCBI ID   WP_000804868.1    Uniprot ID   A0A0J1HZV6
Organism   Bacillus cereus strain 30040     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3863180..3873638
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L6438_RS19965 (BC30040_3944) - 3863837..3864073 (+) 237 WP_000283747.1 hypothetical protein -
  L6438_RS19970 (BC30040_3945) - 3864247..3866355 (-) 2109 WP_071726801.1 polyphosphate kinase -
  L6438_RS19975 (BC30040_3946) ppx 3866464..3868002 (-) 1539 WP_236787076.1 exopolyphosphatase -
  L6438_RS19980 (BC30040_3947) kre 3868180..3868638 (+) 459 WP_000804868.1 YkyB family protein Regulator
  L6438_RS19985 (BC30040_3948) - 3868670..3869332 (-) 663 WP_000922490.1 YkyA family protein -
  L6438_RS19990 (BC30040_3949) - 3870139..3870780 (-) 642 WP_062922045.1 diguanylate cyclase -
  L6438_RS19995 (BC30040_3950) - 3870945..3871178 (+) 234 WP_000939450.1 SPP1 phage holin family protein -
  L6438_RS20000 (BC30040_3951) - 3871210..3871710 (-) 501 WP_000708179.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17787.52 Da        Isoelectric Point: 10.6793

>NTDB_id=80353 L6438_RS19980 WP_000804868.1 3868180..3868638(+) (kre) [Bacillus cereus strain 30040]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=80353 L6438_RS19980 WP_000804868.1 3868180..3868638(+) (kre) [Bacillus cereus strain 30040]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCGAAGTATTTATACTGGTTAAAAAAGACAGCTTTAGAACGCTTAATTACTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTCTCAAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGTTTA
GGTGATTACTTTTTCCATATTCCTCCTACAAAAGAAGATTTTCGAATCCTACCACATCTCGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCGCTAAAAC
AAGAAAAAAAATTAAGTGAGCCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0J1HZV6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment