Detailed information NTG0080342

Bioinformatically predicted

Overview

• Name: sinR
• Type: Regulator
• Locus tag: L6438_RS06625
• Genome accession: NZ_AP022975
• Coordinates: 1276653..1276976 (-)
• Length: 107 a.a.
• NCBI ID: WP_236787872.1
• Uniprot ID: -
• Organism: Bacillus cereus strain 30040
• Function: repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation

Genomic Context

Location: 1271653..1281976

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6438_RS06600 (BC30040_1217)	-	1271986..1273272 (+)	1287	WP_236787853.1	D-alanyl-D-alanine carboxypeptidase family protein	-
L6438_RS06605 (BC30040_1218)	-	1273464..1274033 (+)	570	WP_000767813.1	signal peptidase I	-
L6438_RS06610 (BC30040_1219)	-	1274096..1274683 (+)	588	WP_062921647.1	CalY family protein	-
L6438_RS06615 (BC30040_1220)	-	1274847..1275710 (+)	864	WP_236787861.1	DUF4047 domain-containing protein	-
L6438_RS06620 (BC30040_1221)	calY	1275984..1276577 (+)	594	WP_236787870.1	biofilm matrix protein CalY	-
L6438_RS06625 (BC30040_1222)	sinR	1276653..1276976 (-)	324	WP_236787872.1	helix-turn-helix domain-containing protein	Regulator
L6438_RS06630 (BC30040_1223)	-	1277056..1277190 (-)	135	WP_000276217.1	anti-repressor SinI family protein	-
L6438_RS06635 (BC30040_1224)	inhA1	1277534..1279921 (+)	2388	WP_236787874.1	immune inhibitor A domain-containing protein	-
L6438_RS06640 (BC30040_1225)	-	1280092..1281459 (+)	1368	WP_062921650.1	aldehyde dehydrogenase	-

Sequence

Protein

• Length: 107 a.a.
• Molecular weight: 12368.20 Da
• Isoelectric Point: 8.5404

>NTDB_id=80342 L6438_RS06625 WP_236787872.1 1276653..1276976(-) (sinR) [Bacillus cereus strain 30040]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLF
KDAMNSGVSKEQFREFLEFTKWKQDQK

Nucleotide

• Length: 324 bp

>NTDB_id=80342 L6438_RS06625 WP_236787872.1 1276653..1276976(-) (sinR) [Bacillus cereus strain 30040]
ATGATTGGAGAACGTATAAAACGCCTTCGCTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAGAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCTTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAGATCAAAA
ATAA

Domains

Predicted by InterproScan.

• Helix-turn-helix (HTH_3) (6-60)

• Anti-repressor SinI (SinI) (72-99)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sinR	Bacillus subtilis subsp. subtilis str. 168	66.972	100	0.682