Detailed information NTG0803400

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: RJ643_RS03975
• Genome accession: NZ_CP134389
• Coordinates: 820748..821944 (-)
• Length: 398 a.a.
• NCBI ID: WP_061157982.1
• Uniprot ID: -
• Organism: Escherichia coli strain TUM10828
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 815748..826944

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJ643_RS03955 (RJ643_03955)	-	815800..817056 (+)	1257	WP_001525622.1	cytidylyltransferase domain-containing protein	-
RJ643_RS03960 (RJ643_03960)	neuC	817053..818228 (+)	1176	WP_032144273.1	UDP-N-acetylglucosamine 2-epimerase	-
RJ643_RS03965 (RJ643_03965)	-	818221..819369 (+)	1149	WP_001527662.1	DUF6716 putative glycosyltransferase	-
RJ643_RS03970 (RJ643_03970)	-	819359..820588 (+)	1230	WP_000575410.1	alpha-2,8-polysialyltransferase family protein	-
RJ643_RS03975 (RJ643_03975)	kpsS	820748..821944 (-)	1197	WP_061157982.1	capsule biosynthesis protein	Regulator
RJ643_RS03980 (RJ643_03980)	-	821979..824006 (-)	2028	WP_061157981.1	capsular polysaccharide biosynthesis protein	-
RJ643_RS03985 (RJ643_03985)	kdsB	824003..824743 (-)	741	WP_061157980.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
RJ643_RS03990 (RJ643_03990)	-	824753..826429 (-)	1677	WP_001298258.1	polysaccharide biosynthesis/export family protein	-

Sequence

Protein

• Length: 398 a.a.
• Molecular weight: 47277.55 Da
• Isoelectric Point: 10.1173

>NTDB_id=803400 RJ643_RS03975 WP_061157982.1 820748..821944(-) (kpsS) [Escherichia coli strain TUM10828]
MQGNALTVLLSGKKYLLLQGPMGPFFSDVAEWLESLGRNAVNVAFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYDLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDIKLFKKFRGYLLVKTQVNAVYYGGNTKKTPT

Nucleotide

• Length: 1197 bp

>NTDB_id=803400 RJ643_RS03975 WP_061157982.1 820748..821944(-) (kpsS) [Escherichia coli strain TUM10828]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCCTTTTTCAG
TGATGTTGCCGAGTGGCTAGAGTCATTAGGCCGTAACGCTGTGAATGTTGCCTTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTTCCCGGATGGTTACGGGATCTCCACCGACAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGTTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAAGAAGGATATTTACGTCCGCAGTTTATTACTGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGTTGGCATTACCGTCATGAGTTCCCTCGCTACCGCCACCACAA
ATCGTTTTCCCCCTGGTATGAGGCTCGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTGCCGAGGTTAATGAATGAGCTGGATCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCACCGAAAGA
AAGTTATTTGGTGATCAAGCACCATCCAATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGTTGAGTAAGG
AATATGACTTAGGTGAGCGAGTCATATACGTGCACGATCTCCCGATGCCGGAATTATTACGCCACGCAAAAGCGGTGGTG
ACAATTAACAGTACGGCGGGGATCTCTGCGCTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAAGGATTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCAGATATAAAACTGTTTAAGAAGT
TTCGCGGGTATTTATTGGTTAAGACGCAGGTTAATGCGGTTTATTATGGGGGGAACACAAAAAAAACGCCAACATAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.846	97.739	0.389