Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   P3U32_RS10380 Genome accession   NZ_CP120131
Coordinates   2084810..2085781 (-) Length   323 a.a.
NCBI ID   WP_323703064.1    Uniprot ID   -
Organism   Mammaliicoccus sp. Dog046     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2079810..2090781
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3U32_RS10355 (P3U32_10355) - 2080323..2080844 (+) 522 WP_323703058.1 GrpB family protein -
  P3U32_RS10360 (P3U32_10360) murB 2080914..2081834 (+) 921 WP_323703059.1 UDP-N-acetylmuramate dehydrogenase -
  P3U32_RS10365 (P3U32_10365) - 2081911..2082951 (-) 1041 WP_323703060.1 ferrated catecholamine ABC transporter substrate-binding lipoprotein SstD -
  P3U32_RS10370 (P3U32_10370) - 2083058..2083858 (-) 801 WP_323703062.1 ABC transporter ATP-binding protein -
  P3U32_RS10375 (P3U32_10375) - 2083855..2084820 (-) 966 WP_323703063.1 iron chelate uptake ABC transporter family permease subunit -
  P3U32_RS10380 (P3U32_10380) ceuB 2084810..2085781 (-) 972 WP_323703064.1 ABC transporter permease Machinery gene
  P3U32_RS10385 (P3U32_10385) - 2086231..2086638 (-) 408 WP_323703065.1 FixH family protein -
  P3U32_RS10390 (P3U32_10390) nrdF 2086799..2087767 (-) 969 WP_323703066.1 class 1b ribonucleoside-diphosphate reductase subunit beta -
  P3U32_RS10395 (P3U32_10395) nrdE 2087795..2089900 (-) 2106 WP_323703067.1 class 1b ribonucleoside-diphosphate reductase subunit alpha -
  P3U32_RS10400 (P3U32_10400) nrdI 2089854..2090261 (-) 408 WP_323703068.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -

Sequence

Protein


Download         Length: 323 a.a.        Molecular weight: 35529.02 Da        Isoelectric Point: 10.5467

>NTDB_id=803397 P3U32_RS10380 WP_323703064.1 2084810..2085781(-) (ceuB) [Mammaliicoccus sp. Dog046]
MGKVLMRLDVLIVLLVITTFFSIFIGVSEVQPLHIFNLSDEEKNILFSSRIPRTVSIIISGSSLAICGLIMQQLTRNKFV
SPTTAGTMDWARLGILIALIAFPEANILLKLLFATVLSLLGTLLFMQILKRIQFKDVIFIPLVGIMLGNIVSSFSSFIAL
RTNAVQSIGNFMQGNFSIITSGRYEILYISIPLLVLAFIFANQFTIAGMGKDFSLNLGLNYQKIVNIGLVIASVITALVV
VTVGMMPFLGLIIPNLISMFRGDHLKNALPHTAIFGALFVMICDVFGRLIVFPYEITIGLTIGVIGSFIFIVMLMKGRKR
NAQ

Nucleotide


Download         Length: 972 bp        

>NTDB_id=803397 P3U32_RS10380 WP_323703064.1 2084810..2085781(-) (ceuB) [Mammaliicoccus sp. Dog046]
ATGGGAAAAGTATTAATGCGTTTAGATGTTTTAATTGTTTTATTAGTAATTACAACATTCTTCTCAATTTTTATAGGTGT
TTCTGAGGTTCAACCTTTACATATATTTAATTTATCTGATGAAGAAAAAAATATCCTATTTTCGAGTAGAATTCCTAGAA
CGGTTAGTATCATTATTTCTGGTAGTTCATTAGCGATTTGTGGATTGATTATGCAACAATTGACACGTAATAAGTTTGTT
TCACCAACTACGGCTGGAACTATGGATTGGGCGAGATTAGGTATTCTCATCGCACTTATTGCCTTTCCGGAAGCGAATAT
ATTATTGAAGTTATTATTTGCTACGGTATTGAGTCTTTTAGGTACATTGCTATTTATGCAAATTCTAAAAAGGATTCAAT
TCAAAGATGTCATATTCATACCACTAGTAGGGATAATGTTAGGTAATATCGTTTCTAGTTTTTCATCATTTATTGCGTTG
AGAACGAATGCTGTACAAAGTATAGGTAACTTTATGCAAGGGAATTTTTCGATTATTACTAGTGGTCGATATGAAATTCT
ATATATCAGTATTCCATTACTGGTACTCGCATTTATATTTGCAAATCAATTTACAATCGCAGGTATGGGGAAAGACTTCA
GTTTGAATTTAGGTTTAAATTATCAAAAGATAGTAAATATTGGATTAGTAATCGCGTCAGTTATTACCGCTTTAGTCGTT
GTGACAGTTGGTATGATGCCTTTCTTAGGTTTGATTATTCCAAACTTAATTTCAATGTTTCGTGGTGATCATCTGAAGAA
TGCATTACCGCATACTGCTATATTTGGTGCATTATTTGTTATGATTTGTGATGTTTTTGGTAGATTAATTGTCTTTCCAT
ATGAAATTACAATTGGTTTAACAATTGGCGTCATCGGTAGTTTTATTTTCATAGTAATGTTGATGAAAGGACGTAAGAGA
AATGCTCAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(14-316)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

49.688

99.071

0.492