Detailed information
Bioinformatically predicted
Overview
| Name | ceuB | Type | Machinery gene |
| Locus tag | P3U62_RS10540 | Genome accession | NZ_CP120130 |
| Coordinates | 2122158..2123129 (-) | Length | 323 a.a. |
| NCBI ID | WP_016911805.1 | Uniprot ID | A0A2T4PVZ9 |
| Organism | Mammaliicoccus vitulinus strain Dog047 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2120406..2152615 | 2122158..2123129 | within | 0 |
Gene organization within MGE regions
Location: 2120406..2152615
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P3U62_RS10530 (P3U62_10530) | - | 2120406..2121206 (-) | 801 | WP_016911803.1 | ABC transporter ATP-binding protein | - |
| P3U62_RS10535 (P3U62_10535) | - | 2121203..2122168 (-) | 966 | WP_204107849.1 | iron chelate uptake ABC transporter family permease subunit | - |
| P3U62_RS10540 (P3U62_10540) | ceuB | 2122158..2123129 (-) | 972 | WP_016911805.1 | ABC transporter permease | Machinery gene |
| P3U62_RS10545 (P3U62_10545) | - | 2123256..2123672 (-) | 417 | WP_204198215.1 | FixH family protein | - |
| P3U62_RS10550 (P3U62_10550) | nrdF | 2123893..2124864 (-) | 972 | WP_016911807.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| P3U62_RS10555 (P3U62_10555) | nrdE | 2124892..2126997 (-) | 2106 | WP_016911808.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| P3U62_RS10560 (P3U62_10560) | nrdI | 2126960..2127358 (-) | 399 | WP_016911809.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| P3U62_RS10565 (P3U62_10565) | - | 2127736..2128620 (+) | 885 | WP_016911810.1 | DMT family transporter | - |
| P3U62_RS10570 (P3U62_10570) | queF | 2128620..2129120 (+) | 501 | WP_016911811.1 | preQ(1) synthase | - |
| P3U62_RS10575 (P3U62_10575) | - | 2129419..2130933 (+) | 1515 | WP_107536437.1 | peptide MFS transporter | - |
| P3U62_RS10580 (P3U62_10580) | - | 2131607..2133163 (-) | 1557 | Protein_2060 | IS3 family transposase | - |
| P3U62_RS10585 (P3U62_10585) | - | 2133560..2135062 (+) | 1503 | WP_204198301.1 | peptide MFS transporter | - |
| P3U62_RS10590 (P3U62_10590) | - | 2135116..2135697 (-) | 582 | WP_016911771.1 | 5' nucleotidase, NT5C type | - |
| P3U62_RS10595 (P3U62_10595) | hisC | 2135764..2136831 (-) | 1068 | WP_016911772.1 | histidinol-phosphate transaminase | - |
| P3U62_RS10600 (P3U62_10600) | - | 2136937..2138451 (-) | 1515 | WP_323707003.1 | ABC transporter permease/substrate-binding protein | - |
| P3U62_RS10605 (P3U62_10605) | - | 2138451..2139410 (-) | 960 | WP_103323517.1 | ABC transporter ATP-binding protein | - |
| P3U62_RS10610 (P3U62_10610) | recQ | 2139501..2141279 (-) | 1779 | WP_016911775.1 | DNA helicase RecQ | - |
| P3U62_RS10615 (P3U62_10615) | - | 2141302..2143173 (-) | 1872 | WP_323707004.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| P3U62_RS10620 (P3U62_10620) | - | 2143259..2144074 (+) | 816 | WP_016911777.1 | ZIP family metal transporter | - |
| P3U62_RS10625 (P3U62_10625) | ltaS | 2144131..2146071 (-) | 1941 | WP_103322609.1 | polyglycerol-phosphate lipoteichoic acid synthase LtaS | - |
| P3U62_RS10630 (P3U62_10630) | - | 2146272..2147276 (-) | 1005 | WP_016911779.1 | biotin-dependent carboxyltransferase family protein | - |
| P3U62_RS10635 (P3U62_10635) | - | 2147267..2147968 (-) | 702 | WP_107556688.1 | carboxyltransferase domain-containing protein | - |
| P3U62_RS10640 (P3U62_10640) | - | 2148004..2148219 (-) | 216 | WP_016911781.1 | hypothetical protein | - |
| P3U62_RS10645 (P3U62_10645) | pabB | 2148281..2150029 (-) | 1749 | WP_204198298.1 | aminodeoxychorismate synthase component I | - |
| P3U62_RS10650 (P3U62_10650) | - | 2150007..2150609 (-) | 603 | WP_016911783.1 | anthranilate synthase component II | - |
| P3U62_RS10655 (P3U62_10655) | queC | 2150813..2151481 (+) | 669 | WP_016911784.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| P3U62_RS10660 (P3U62_10660) | queD | 2151481..2151912 (+) | 432 | WP_204198296.1 | 6-carboxytetrahydropterin synthase QueD | - |
| P3U62_RS10665 (P3U62_10665) | queE | 2151905..2152615 (+) | 711 | WP_016911786.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
Sequence
Protein
Download Length: 323 a.a. Molecular weight: 35442.90 Da Isoelectric Point: 10.5946
>NTDB_id=803367 P3U62_RS10540 WP_016911805.1 2122158..2123129(-) (ceuB) [Mammaliicoccus vitulinus strain Dog047]
MGKFLMRLDVLAILLVIATFFSIFIGVSEVKPLHIFNLSDEQKNILVSSRIPRTVSIIISGSSLAICGLIMQQLTRNKFV
SPTTAGTMDWARLGILISLIAFPEANILVKLLFATLLSLLGTMLFMQILQRIQFKDVIFIPLVGIMLGNIVSSFSSFVAL
RTNAVQSIGNFMQGNFSIITSGRYEILYISIPLLILAFIFANQFTIAGMGKDFSVNLGLNYQKVVNIGLIIASIITALVV
VTVGMMPFLGLIIPNLISMFRGDHLKNALPHTAIFGALFVMICDVLGRLIIFPYEITIGLTIGVIGSFIFIVMLMKGRSR
NAQ
MGKFLMRLDVLAILLVIATFFSIFIGVSEVKPLHIFNLSDEQKNILVSSRIPRTVSIIISGSSLAICGLIMQQLTRNKFV
SPTTAGTMDWARLGILISLIAFPEANILVKLLFATLLSLLGTMLFMQILQRIQFKDVIFIPLVGIMLGNIVSSFSSFVAL
RTNAVQSIGNFMQGNFSIITSGRYEILYISIPLLILAFIFANQFTIAGMGKDFSVNLGLNYQKVVNIGLIIASIITALVV
VTVGMMPFLGLIIPNLISMFRGDHLKNALPHTAIFGALFVMICDVLGRLIIFPYEITIGLTIGVIGSFIFIVMLMKGRSR
NAQ
Nucleotide
Download Length: 972 bp
>NTDB_id=803367 P3U62_RS10540 WP_016911805.1 2122158..2123129(-) (ceuB) [Mammaliicoccus vitulinus strain Dog047]
ATGGGAAAGTTTTTAATGCGTTTAGATGTTTTAGCTATATTATTAGTAATCGCAACATTTTTCTCGATTTTTATAGGTGT
CTCTGAGGTAAAACCTTTACATATATTTAATCTATCTGATGAACAAAAAAATATATTAGTATCGAGTAGGATTCCAAGAA
CAGTAAGTATTATTATTTCGGGTAGCTCTTTAGCAATTTGTGGGCTTATTATGCAACAGCTCACGCGTAATAAATTTGTT
TCGCCAACAACGGCTGGAACAATGGACTGGGCTAGATTAGGTATTTTAATTTCTTTAATTGCTTTTCCAGAGGCAAATAT
ATTAGTTAAATTACTATTTGCTACATTGTTGAGTTTGTTAGGAACAATGTTATTCATGCAAATTCTGCAAAGAATTCAAT
TCAAAGATGTCATATTCATTCCACTAGTTGGTATTATGCTCGGAAATATTGTTTCTAGTTTTTCATCTTTTGTTGCTTTA
AGAACGAATGCTGTGCAAAGTATAGGGAATTTCATGCAAGGTAATTTTTCAATTATTACAAGCGGTAGATATGAAATTTT
ATATATAAGTATTCCGTTATTGATTCTTGCATTTATATTTGCAAATCAATTTACGATTGCAGGAATGGGTAAAGATTTTA
GTGTGAACTTAGGACTTAATTATCAAAAAGTCGTCAATATCGGGCTGATTATCGCATCAATTATTACCGCGCTCGTTGTT
GTAACAGTTGGAATGATGCCTTTCTTAGGATTGATTATTCCAAACTTAATATCAATGTTTAGAGGTGATCATTTAAAAAA
TGCACTTCCACATACAGCTATTTTCGGCGCATTGTTTGTTATGATTTGTGATGTATTAGGTAGACTAATCATTTTCCCTT
ATGAAATTACAATTGGATTAACAATTGGTGTAATTGGTAGTTTTATTTTTATAGTAATGCTGATGAAAGGACGATCAAGA
AATGCTCAATAG
ATGGGAAAGTTTTTAATGCGTTTAGATGTTTTAGCTATATTATTAGTAATCGCAACATTTTTCTCGATTTTTATAGGTGT
CTCTGAGGTAAAACCTTTACATATATTTAATCTATCTGATGAACAAAAAAATATATTAGTATCGAGTAGGATTCCAAGAA
CAGTAAGTATTATTATTTCGGGTAGCTCTTTAGCAATTTGTGGGCTTATTATGCAACAGCTCACGCGTAATAAATTTGTT
TCGCCAACAACGGCTGGAACAATGGACTGGGCTAGATTAGGTATTTTAATTTCTTTAATTGCTTTTCCAGAGGCAAATAT
ATTAGTTAAATTACTATTTGCTACATTGTTGAGTTTGTTAGGAACAATGTTATTCATGCAAATTCTGCAAAGAATTCAAT
TCAAAGATGTCATATTCATTCCACTAGTTGGTATTATGCTCGGAAATATTGTTTCTAGTTTTTCATCTTTTGTTGCTTTA
AGAACGAATGCTGTGCAAAGTATAGGGAATTTCATGCAAGGTAATTTTTCAATTATTACAAGCGGTAGATATGAAATTTT
ATATATAAGTATTCCGTTATTGATTCTTGCATTTATATTTGCAAATCAATTTACGATTGCAGGAATGGGTAAAGATTTTA
GTGTGAACTTAGGACTTAATTATCAAAAAGTCGTCAATATCGGGCTGATTATCGCATCAATTATTACCGCGCTCGTTGTT
GTAACAGTTGGAATGATGCCTTTCTTAGGATTGATTATTCCAAACTTAATATCAATGTTTAGAGGTGATCATTTAAAAAA
TGCACTTCCACATACAGCTATTTTCGGCGCATTGTTTGTTATGATTTGTGATGTATTAGGTAGACTAATCATTTTCCCTT
ATGAAATTACAATTGGATTAACAATTGGTGTAATTGGTAGTTTTATTTTTATAGTAATGCTGATGAAAGGACGATCAAGA
AATGCTCAATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ceuB | Campylobacter jejuni subsp. jejuni 81-176 |
49.527 |
98.142 |
0.486 |