Detailed information NTG0803335

Bioinformatically predicted

Overview

• Name: ceuB
• Type: Machinery gene
• Locus tag: P3U26_RS11170
• Genome accession: NZ_CP120129
• Coordinates: 2228328..2229299 (-)
• Length: 323 a.a.
• NCBI ID: WP_025905417.1
• Uniprot ID: A0AAJ4SJJ8
• Organism: Mammaliicoccus sciuri strain Dog048
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	2229991..2239493	2228328..2229299	flank	692

Gene organization within MGE regions

Location: 2228328..2239493

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P3U26_RS11170 (P3U26_11170)	ceuB	2228328..2229299 (-)	972	WP_025905417.1	ABC transporter permease	Machinery gene
P3U26_RS11175 (P3U26_11175)	-	2229425..2229841 (-)	417	WP_058612032.1	FixH family protein	-
P3U26_RS11180 (P3U26_11180)	nrdF	2229991..2230962 (-)	972	WP_048539937.1	class 1b ribonucleoside-diphosphate reductase subunit beta	-
P3U26_RS11185 (P3U26_11185)	nrdE	2230991..2233096 (-)	2106	WP_058612033.1	class 1b ribonucleoside-diphosphate reductase subunit alpha	-
P3U26_RS11190 (P3U26_11190)	nrdI	2233059..2233457 (-)	399	WP_025905413.1	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	-
P3U26_RS11195 (P3U26_11195)	-	2233832..2234716 (+)	885	WP_048539939.1	DMT family transporter	-
P3U26_RS11200 (P3U26_11200)	queF	2234716..2235216 (+)	501	WP_048539940.1	preQ(1) synthase	-
P3U26_RS11205 (P3U26_11205)	-	2235510..2237024 (+)	1515	WP_048539941.1	peptide MFS transporter	-
P3U26_RS11210 (P3U26_11210)	-	2237370..2238872 (+)	1503	WP_048539942.1	peptide MFS transporter	-
P3U26_RS11215 (P3U26_11215)	-	2238912..2239493 (-)	582	WP_048539943.1	5' nucleotidase, NT5C type	-

Sequence

Protein

• Length: 323 a.a.
• Molecular weight: 35476.97 Da
• Isoelectric Point: 10.7243

>NTDB_id=803335 P3U26_RS11170 WP_025905417.1 2228328..2229299(-) (ceuB) [Mammaliicoccus sciuri strain Dog048]
MGKFLMRLDVLIILLVIATFFSIFIGVSEVKPLHILNLTDEQKNILVSSRIPRTVSIIISGSSLAICGLIMQQLTRNKFV
SPTTAGTMDWARLGILISLIAFPEANILLKLLFATLLSLFGTMLFMQILRRIQFKDVIFIPLVGIMLGNIVSSFSSFVAL
RTNAVQSIGNFMQGNFSIITSGRYEILYISIPLLILAFIFANQFTIAGMGKDFSVNLGLNYQKVVNIGLIIASIITALVV
VTVGMMPFLGLIIPNLVSIFRGDHLKNALPHTAVFGALFVMICDVIGRLIIFPYEITIGLTIGVIGSFIFIVLLMKGRSR
NAQ

Nucleotide

• Length: 972 bp

>NTDB_id=803335 P3U26_RS11170 WP_025905417.1 2228328..2229299(-) (ceuB) [Mammaliicoccus sciuri strain Dog048]
ATGGGAAAGTTTTTAATGCGTTTAGATGTTTTGATTATTTTATTAGTAATTGCAACGTTCTTCTCTATATTTATAGGTGT
TTCAGAAGTAAAACCATTACATATATTAAATTTAACAGACGAACAGAAGAACATTTTAGTATCAAGTAGAATTCCAAGAA
CAGTCAGTATTATTATTTCAGGTAGCTCGTTAGCTATTTGTGGACTGATTATGCAACAGCTTACAAGAAATAAATTCGTT
TCTCCAACAACTGCAGGGACAATGGATTGGGCCAGATTAGGTATATTAATTTCTCTTATCGCTTTTCCAGAAGCCAACAT
ACTACTTAAATTATTATTTGCTACATTATTAAGTTTATTTGGAACAATGCTATTCATGCAAATTCTCCGTAGAATTCAAT
TTAAAGATGTTATTTTTATACCATTAGTTGGTATTATGCTCGGAAACATAGTGTCAAGTTTTTCATCTTTTGTTGCATTA
CGTACAAATGCTGTACAAAGTATTGGTAATTTTATGCAAGGTAATTTCTCAATTATTACAAGCGGTAGATATGAAATTCT
TTATATTAGTATTCCGTTATTGATTTTAGCATTTATATTTGCGAATCAATTTACGATTGCTGGTATGGGTAAAGATTTTA
GTGTGAATTTAGGACTTAATTATCAAAAAGTCGTCAATATCGGACTGATTATTGCCTCAATCATTACGGCACTTGTTGTT
GTAACAGTTGGTATGATGCCATTCTTAGGTTTAATTATTCCTAACTTAGTTTCAATATTCAGAGGAGATCATTTAAAAAA
TGCATTGCCGCATACAGCTGTATTTGGTGCATTGTTTGTTATGATTTGTGATGTAATAGGTCGATTAATTATATTCCCTT
ATGAAATTACAATTGGTTTAACAATTGGTGTGATTGGTAGTTTCATATTTATAGTATTGCTGATGAAAGGACGTTCAAGA
AATGCTCAATAA

Domains

Predicted by InterproScan.

• FecCD transport family (FecCD) (14-316)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ceuB	Campylobacter jejuni subsp. jejuni 81-176	51.104	98.142	0.502