Detailed information NTG0803301

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: RJ650_RS00855
• Genome accession: NZ_CP134384
• Coordinates: 181034..182017 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain TUM11352
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 176034..187017

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJ650_RS00840 (RJ650_00840)	dppA	177178..178785 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
RJ650_RS00845 (RJ650_00845)	dppB	179092..180111 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
RJ650_RS00850 (RJ650_00850)	dppC	180121..181023 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
RJ650_RS00855 (RJ650_00855)	amiE	181034..182017 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
RJ650_RS00860 (RJ650_00860)	dppF	182014..183018 (+)	1005	WP_000103571.1	dipeptide ABC transporter ATP-binding subunit DppF	-
RJ650_RS00865 (RJ650_00865)	yhjV	183048..184319 (-)	1272	WP_001296513.1	aromatic amino acid transport family protein	-
RJ650_RS00870 (RJ650_00870)	-	184795..184902 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
RJ650_RS00875 (RJ650_00875)	-	185278..185385 (+)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
RJ650_RS00880 (RJ650_00880)	-	185761..185868 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=803301 RJ650_RS00855 WP_001196477.1 181034..182017(+) (amiE) [Escherichia coli strain TUM11352]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=803301 RJ650_RS00855 WP_001196477.1 181034..182017(+) (amiE) [Escherichia coli strain TUM11352]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCTGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404