Detailed information NTG0802982

Bioinformatically predicted

Overview

• Name: ceuB
• Type: Machinery gene
• Locus tag: P3U34_RS11500
• Genome accession: NZ_CP120106
• Coordinates: 2268532..2269503 (-)
• Length: 323 a.a.
• NCBI ID: WP_025905417.1
• Uniprot ID: A0AAJ4SJJ8
• Organism: Mammaliicoccus sciuri strain Dog108
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	2270195..2279697	2268532..2269503	flank	692

Gene organization within MGE regions

Location: 2268532..2279697

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P3U34_RS11500 (P3U34_11500)	ceuB	2268532..2269503 (-)	972	WP_025905417.1	ABC transporter permease	Machinery gene
P3U34_RS11505 (P3U34_11505)	-	2269629..2270045 (-)	417	WP_058612032.1	FixH family protein	-
P3U34_RS11510 (P3U34_11510)	nrdF	2270195..2271166 (-)	972	WP_048539937.1	class 1b ribonucleoside-diphosphate reductase subunit beta	-
P3U34_RS11515 (P3U34_11515)	nrdE	2271195..2273300 (-)	2106	WP_058612033.1	class 1b ribonucleoside-diphosphate reductase subunit alpha	-
P3U34_RS11520 (P3U34_11520)	nrdI	2273263..2273661 (-)	399	WP_025905413.1	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	-
P3U34_RS11525 (P3U34_11525)	-	2274036..2274920 (+)	885	WP_048539939.1	DMT family transporter	-
P3U34_RS11530 (P3U34_11530)	queF	2274920..2275420 (+)	501	WP_048539940.1	preQ(1) synthase	-
P3U34_RS11535 (P3U34_11535)	-	2275714..2277228 (+)	1515	WP_048539941.1	peptide MFS transporter	-
P3U34_RS11540 (P3U34_11540)	-	2277574..2279076 (+)	1503	WP_048539942.1	peptide MFS transporter	-
P3U34_RS11545 (P3U34_11545)	-	2279116..2279697 (-)	582	WP_048539943.1	5' nucleotidase, NT5C type	-

Sequence

Protein

• Length: 323 a.a.
• Molecular weight: 35476.97 Da
• Isoelectric Point: 10.7243

>NTDB_id=802982 P3U34_RS11500 WP_025905417.1 2268532..2269503(-) (ceuB) [Mammaliicoccus sciuri strain Dog108]
MGKFLMRLDVLIILLVIATFFSIFIGVSEVKPLHILNLTDEQKNILVSSRIPRTVSIIISGSSLAICGLIMQQLTRNKFV
SPTTAGTMDWARLGILISLIAFPEANILLKLLFATLLSLFGTMLFMQILRRIQFKDVIFIPLVGIMLGNIVSSFSSFVAL
RTNAVQSIGNFMQGNFSIITSGRYEILYISIPLLILAFIFANQFTIAGMGKDFSVNLGLNYQKVVNIGLIIASIITALVV
VTVGMMPFLGLIIPNLVSIFRGDHLKNALPHTAVFGALFVMICDVIGRLIIFPYEITIGLTIGVIGSFIFIVLLMKGRSR
NAQ

Nucleotide

• Length: 972 bp

>NTDB_id=802982 P3U34_RS11500 WP_025905417.1 2268532..2269503(-) (ceuB) [Mammaliicoccus sciuri strain Dog108]
ATGGGAAAGTTTTTAATGCGTTTAGATGTTTTGATTATTTTATTAGTAATTGCAACGTTCTTCTCTATATTTATAGGTGT
TTCAGAAGTAAAACCATTACATATATTAAATTTAACAGACGAACAGAAGAACATTTTAGTATCAAGTAGAATTCCAAGAA
CAGTCAGTATTATTATTTCAGGTAGCTCGTTAGCTATTTGTGGACTGATTATGCAACAGCTTACAAGAAATAAATTCGTT
TCTCCAACAACTGCAGGGACAATGGATTGGGCCAGATTAGGTATATTAATTTCTCTTATCGCTTTTCCAGAAGCCAACAT
ACTACTTAAATTATTATTTGCTACATTATTAAGTTTATTTGGAACAATGCTATTCATGCAAATTCTCCGTAGAATTCAAT
TTAAAGATGTTATTTTTATACCATTAGTTGGTATTATGCTCGGAAACATAGTGTCAAGTTTTTCATCTTTTGTTGCATTA
CGTACAAATGCTGTACAAAGTATTGGTAATTTTATGCAAGGTAATTTCTCAATTATTACAAGCGGTAGATATGAAATTCT
TTATATTAGTATTCCGTTATTGATTTTAGCATTTATATTTGCGAATCAATTTACGATTGCTGGTATGGGTAAAGATTTTA
GTGTGAATTTAGGACTTAATTATCAAAAAGTCGTCAATATCGGACTGATTATTGCCTCAATCATTACGGCACTTGTTGTT
GTAACAGTTGGTATGATGCCATTCTTAGGTTTAATTATTCCTAACTTAGTTTCAATATTCAGAGGAGATCATTTAAAAAA
TGCATTGCCGCATACAGCTGTATTTGGTGCATTGTTTGTTATGATTTGTGATGTAATAGGTCGATTAATTATATTCCCTT
ATGAAATTACAATTGGTTTAACAATTGGTGTGATTGGTAGTTTCATATTTATAGTATTGCTGATGAAAGGACGTTCAAGA
AATGCTCAATAA

Domains

Predicted by InterproScan.

• FecCD transport family (FecCD) (14-316)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ceuB	Campylobacter jejuni subsp. jejuni 81-176	51.104	98.142	0.502