Detailed information NTG0802980

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: RJ645_RS01045
• Genome accession: NZ_CP134366
• Coordinates: 231512..232495 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196481.1
• Uniprot ID: -
• Organism: Escherichia coli strain TUM12368
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 226512..237495

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJ645_RS01030 (RJ645_01030)	dppA	227812..229419 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
RJ645_RS01035 (RJ645_01035)	dppB	229570..230589 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
RJ645_RS01040 (RJ645_01040)	dppC	230599..231501 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
RJ645_RS01045 (RJ645_01045)	amiE	231512..232495 (+)	984	WP_001196481.1	dipeptide ABC transporter ATP-binding protein	Regulator
RJ645_RS01050 (RJ645_01050)	dppF	232492..233496 (+)	1005	WP_000107033.1	dipeptide ABC transporter ATP-binding subunit DppF	-
RJ645_RS01055 (RJ645_01055)	yhjV	233526..234797 (-)	1272	WP_022646242.1	aromatic amino acid transport family protein	-
RJ645_RS01060 (RJ645_01060)	-	235273..235380 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
RJ645_RS01065 (RJ645_01065)	-	235755..235862 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
RJ645_RS01070 (RJ645_01070)	-	236239..236346 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
RJ645_RS01075 (RJ645_01075)	-	236723..236830 (+)	108	WP_000170736.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35798.31 Da
• Isoelectric Point: 6.5813

>NTDB_id=802980 RJ645_RS01045 WP_001196481.1 231512..232495(+) (amiE) [Escherichia coli strain TUM12368]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAIAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=802980 RJ645_RS01045 WP_001196481.1 231512..232495(+) (amiE) [Escherichia coli strain TUM12368]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATAGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGATAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGTCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCACTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407