Detailed information NTG0802813

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: RJ646_RS01000
• Genome accession: NZ_CP134358
• Coordinates: 214035..215018 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain TUM13936
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 209035..220018

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJ646_RS00980 (RJ646_00980)	dppA	210178..211785 (+)	1608	WP_276269874.1	dipeptide ABC transporter substrate-binding protein DppA	-
RJ646_RS00985 (RJ646_00985)	-	211848..212075 (-)	228	WP_032153267.1	hypothetical protein	-
RJ646_RS00990 (RJ646_00990)	dppB	212093..213112 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
RJ646_RS00995 (RJ646_00995)	dppC	213122..214024 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
RJ646_RS01000 (RJ646_01000)	amiE	214035..215018 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
RJ646_RS01005 (RJ646_01005)	dppF	215015..216019 (+)	1005	WP_000107036.1	dipeptide ABC transporter ATP-binding subunit DppF	-
RJ646_RS01010 (RJ646_01010)	yhjV	216049..217320 (-)	1272	WP_001328774.1	aromatic amino acid transport family protein	-
RJ646_RS01015 (RJ646_01015)	-	217796..217903 (+)	108	WP_072193518.1	type I toxin-antitoxin system toxin Ldr family protein	-
RJ646_RS01020 (RJ646_01020)	-	218279..218386 (+)	108	WP_077628235.1	type I toxin-antitoxin system toxin Ldr family protein	-
RJ646_RS01025 (RJ646_01025)	-	218762..218869 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=802813 RJ646_RS01000 WP_001196486.1 214035..215018(+) (amiE) [Escherichia coli strain TUM13936]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=802813 RJ646_RS01000 WP_001196486.1 214035..215018(+) (amiE) [Escherichia coli strain TUM13936]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTGAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGATCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCCGGTCAGGTGGTGGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTTGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404