Detailed information NTG0802709

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: RI578_RS32025
• Genome accession: NZ_CP134203
• Coordinates: 6982589..6983944 (+)
• Length: 451 a.a.
• NCBI ID: WP_310874307.1
• Uniprot ID: -
• Organism: Streptomyces sp. BB1-1-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 6977589..6988944

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RI578_RS32005 (RI578_32005)	-	6978662..6979489 (-)	828	WP_310874303.1	peptidylprolyl isomerase	-
RI578_RS32010 (RI578_32010)	-	6979673..6980380 (+)	708	WP_310874304.1	MBL fold metallo-hydrolase	-
RI578_RS32015 (RI578_32015)	hisS	6980394..6981656 (+)	1263	WP_310874305.1	histidine--tRNA ligase	-
RI578_RS32020 (RI578_32020)	-	6981857..6982519 (+)	663	WP_310874306.1	vitamin K epoxide reductase family protein	-
RI578_RS32025 (RI578_32025)	rarA	6982589..6983944 (+)	1356	WP_310874307.1	replication-associated recombination protein A	Machinery gene
RI578_RS32030 (RI578_32030)	rpsD	6984241..6984855 (+)	615	WP_003977321.1	30S ribosomal protein S4	-
RI578_RS32035 (RI578_32035)	-	6984904..6987090 (-)	2187	WP_310874308.1	regulator	-
RI578_RS32040 (RI578_32040)	-	6987256..6987708 (+)	453	WP_310874309.1	DUF948 domain-containing protein	-
RI578_RS32045 (RI578_32045)	-	6987716..6988072 (+)	357	WP_210961462.1	hypothetical protein	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 48266.49 Da
• Isoelectric Point: 6.0673

>NTDB_id=802709 RI578_RS32025 WP_310874307.1 6982589..6983944(+) (rarA) [Streptomyces sp. BB1-1-1]
MEPDLFTAAAEERQENDPTGSPLAVRMRPRTLDEVVGQQHLLKPGSPLRRLVGEGGSGPAGPSSVILWGPPGTGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIDGARRAVGGYGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDDDVRDLVRRALTDERGLKEAVGLPEDTEEHLLRIAGGDARRALTALEAAAGAALDKGETE
IGLTTLEETVDRAAVKYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPNAL
PIAVAAAQAVAMIGFPEAGLTLSHATIALALAPKSNAATTAIGAALDDVRKGHAGPVPSHLRDSHYKGAGKLGHGQGYVY
PHDLPEGIAAQQYAPDELKDRTYYTPTRHGAEARYADAVEWTRGHLGRKRS

Nucleotide

• Length: 1356 bp

>NTDB_id=802709 RI578_RS32025 WP_310874307.1 6982589..6983944(+) (rarA) [Streptomyces sp. BB1-1-1]
GTGGAGCCCGACCTGTTCACCGCCGCAGCCGAAGAACGCCAGGAGAATGACCCGACCGGCAGCCCCCTCGCCGTGCGGAT
GCGCCCGCGCACCCTCGACGAGGTCGTCGGCCAGCAGCACCTGCTCAAGCCCGGATCCCCCCTGCGCCGACTGGTCGGCG
AGGGCGGCTCCGGCCCCGCGGGGCCGTCCTCGGTCATCCTCTGGGGCCCGCCGGGCACCGGCAAGACCACCCTGGCGTAC
GTCGTCTCCAAGGCCACCAACAAGCGCTTCGTGGAGCTGTCGGCGATCACCGCGGGCGTCAAGGAGGTCCGCGCGGTCAT
CGACGGCGCCCGCCGCGCGGTCGGGGGGTACGGCAAGGAGACCGTCCTCTTCCTCGACGAGATCCACCGCTTCAGCAAGG
CCCAGCAGGACTCCCTGCTCCCGGCCGTCGAGAACCGCTGGGTCACCCTGATCGCCGCCACCACCGAGAACCCGTACTTC
TCGGTGATCTCCCCCCTGCTCTCCCGCTCCCTCCTCCTCACCCTCGAACCCCTCACCGACGACGACGTCCGGGACCTGGT
CCGCCGGGCCCTGACCGACGAGCGCGGCCTGAAGGAGGCCGTCGGTCTCCCCGAGGACACCGAGGAGCACCTGCTGCGCA
TCGCCGGCGGCGACGCCCGCCGTGCCCTGACCGCGCTGGAGGCCGCCGCCGGGGCCGCGCTGGACAAGGGCGAGACGGAG
ATCGGCCTGACCACGCTGGAGGAGACGGTCGACCGGGCCGCGGTGAAGTACGACCGCGACGGCGACCAGCACTACGACGT
CGCCAGTGCCCTGATCAAGTCCATCCGCGGCTCCGACGTGGACGCCGCCCTGCACTACCTGGCCCGGATGATCGAGGCCG
GCGAGGACCCCCGCTTCATCGCGCGGCGTCTGATGATCTCCGCCAGCGAGGACATCGGCCTGGCCGATCCGAACGCGCTG
CCGATCGCCGTCGCCGCCGCCCAGGCCGTCGCCATGATCGGCTTCCCCGAGGCCGGCCTCACCCTCAGCCACGCCACCAT
CGCCCTGGCCCTCGCCCCCAAGTCCAACGCCGCGACCACCGCCATCGGCGCCGCCCTGGACGACGTACGCAAGGGACATG
CCGGACCGGTCCCCTCGCACCTGCGCGACAGCCACTACAAGGGCGCGGGCAAGCTCGGACACGGGCAGGGGTACGTGTAC
CCGCACGACCTGCCGGAGGGCATCGCCGCCCAGCAGTACGCGCCGGACGAGCTGAAGGACCGCACGTACTACACCCCGAC
CCGGCACGGCGCCGAGGCCCGGTACGCGGACGCGGTGGAGTGGACCCGCGGGCACCTCGGTCGCAAGCGGTCCTGA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

• AAA C-terminal domain (AAA_assoc_2) (200-276)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-441)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	44.111	96.009	0.424