Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   RIU97_RS14535 Genome accession   NZ_CP134201
Coordinates   3323190..3324164 (-) Length   324 a.a.
NCBI ID   WP_404956848.1    Uniprot ID   -
Organism   Streptomyces sp. 147326     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 3318190..3329164
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RIU97_RS14515 (RIU97_14485) - 3320266..3320649 (-) 384 WP_361770378.1 DUF6113 family protein -
  RIU97_RS14520 (RIU97_14490) mshB 3320646..3321542 (-) 897 WP_404956843.1 N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase -
  RIU97_RS14525 (RIU97_14495) - 3321566..3321760 (-) 195 WP_361770372.1 hypothetical protein -
  RIU97_RS14530 (RIU97_14500) - 3322154..3323197 (-) 1044 WP_404956846.1 ABC transporter ATP-binding protein -
  RIU97_RS14535 (RIU97_14505) amiE 3323190..3324164 (-) 975 WP_404956848.1 ABC transporter ATP-binding protein Regulator
  RIU97_RS14540 (RIU97_14510) - 3324177..3325208 (-) 1032 WP_404956850.1 ABC transporter permease -
  RIU97_RS14545 (RIU97_14515) - 3325201..3326124 (-) 924 WP_404956852.1 ABC transporter permease -
  RIU97_RS14550 (RIU97_14520) - 3326156..3327787 (-) 1632 WP_404956854.1 ABC transporter substrate-binding protein -
  RIU97_RS14555 (RIU97_14525) - 3327894..3328820 (-) 927 WP_404956857.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 324 a.a.        Molecular weight: 35265.23 Da        Isoelectric Point: 6.7483

>NTDB_id=802475 RIU97_RS14535 WP_404956848.1 3323190..3324164(-) (amiE) [Streptomyces sp. 147326]
MLLEVRDLHVEFKTRDGVAKAVNGVDYSVDEGETLAVLGESGSGKSVTAQAVMGILDMPPGRIAGGEILFKGKDLLKMKE
EERRRIRGADMAMIFQDALSSLNPVLSVGKQLGEMYEVHRGMSRKDAKAKAVELMDRVKIPAAKQRVGDFPHQFSGGMRQ
RIMIAMALALEPSLIIADEPTTALDVTVQAQVMDLLAELQRELNMGLILITHDLGVVADVADKIAVMYAGRIVEAAPVHE
IYKAPAHPYTRGLLDSIPRLDQKGQELYAIKGLPPNLLAIPPGCAFNPRCPMAQALCRAEVPPLAQVAGERTSACFFWKE
CLRG

Nucleotide


Download         Length: 975 bp        

>NTDB_id=802475 RIU97_RS14535 WP_404956848.1 3323190..3324164(-) (amiE) [Streptomyces sp. 147326]
ATGCTGCTCGAAGTCCGCGACCTGCACGTGGAATTCAAGACGCGCGACGGAGTCGCGAAGGCGGTCAACGGTGTCGACTA
CTCGGTGGACGAGGGCGAGACGCTCGCCGTGCTCGGCGAGTCGGGCTCGGGCAAATCGGTGACCGCCCAGGCCGTGATGG
GGATCCTCGACATGCCGCCGGGCCGGATCGCGGGCGGCGAGATCCTCTTCAAGGGCAAGGACCTCCTCAAGATGAAGGAG
GAGGAGCGGCGCAGGATCCGCGGCGCCGACATGGCGATGATCTTCCAGGACGCGCTCTCGTCCCTGAACCCGGTCCTGAG
CGTGGGCAAGCAGCTCGGCGAGATGTACGAGGTCCACCGCGGGATGTCCCGCAAGGACGCCAAGGCCAAGGCCGTCGAGC
TGATGGACCGGGTGAAGATCCCGGCGGCGAAGCAGCGGGTGGGGGACTTCCCGCACCAGTTCTCGGGCGGCATGCGCCAG
CGCATCATGATCGCCATGGCGCTGGCCCTGGAGCCCTCGCTGATCATCGCGGACGAGCCGACGACGGCCCTGGACGTGAC
CGTCCAGGCCCAGGTGATGGACCTGCTGGCCGAGCTGCAGCGCGAGCTCAACATGGGCCTCATCCTGATCACCCACGACC
TGGGCGTGGTCGCCGACGTGGCCGACAAGATCGCTGTCATGTACGCGGGCCGGATCGTCGAGGCGGCCCCCGTCCACGAG
ATCTACAAGGCGCCCGCCCACCCGTACACGCGCGGACTGCTGGATTCCATCCCGCGCCTGGACCAGAAGGGCCAGGAGCT
GTACGCGATCAAGGGCCTGCCGCCGAACCTGCTGGCCATCCCGCCCGGCTGCGCCTTCAACCCGCGCTGTCCGATGGCCC
AGGCCCTCTGCCGCGCCGAGGTCCCGCCGCTCGCGCAGGTGGCCGGGGAACGGACCAGCGCGTGCTTCTTCTGGAAGGAG
TGCCTCCGTGGCTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(23-181)

Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY)

(233-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

47.975

99.074

0.475
  amiE Streptococcus thermophilus LMG 18311

47.975

99.074

0.475
  amiE Streptococcus thermophilus LMD-9

47.975

99.074

0.475
  oppD Streptococcus mutans UA159

47.152

97.531

0.46