Detailed information NTG0802426

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: P3U43_RS06700
• Genome accession: NZ_CP120062
• Coordinates: 1346803..1347120 (+)
• Length: 105 a.a.
• NCBI ID: WP_070045385.1
• Uniprot ID: A0AAX3W128
• Organism: Mammaliicoccus lentus strain Dog127_L
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1341803..1352120

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P3U43_RS06660 (P3U43_06660)	-	1341918..1342109 (+)	192	WP_017000229.1	YqgQ family protein	-
P3U43_RS06665 (P3U43_06665)	-	1342106..1343077 (+)	972	WP_017000230.1	ROK family glucokinase	-
P3U43_RS06670 (P3U43_06670)	-	1343077..1343391 (+)	315	WP_017000231.1	MTH1187 family thiamine-binding protein	-
P3U43_RS06675 (P3U43_06675)	-	1343421..1343660 (-)	240	WP_017000232.1	DUF2759 domain-containing protein	-
P3U43_RS06680 (P3U43_06680)	-	1343758..1344390 (+)	633	WP_017000233.1	MBL fold metallo-hydrolase	-
P3U43_RS06685 (P3U43_06685)	-	1344455..1344703 (-)	249	WP_017000234.1	DUF2626 family protein	-
P3U43_RS06690 (P3U43_06690)	comGA	1344856..1345752 (+)	897	WP_017000235.1	competence type IV pilus ATPase ComGA	Machinery gene
P3U43_RS06695 (P3U43_06695)	comGB	1345749..1346789 (+)	1041	WP_228064610.1	competence type IV pilus assembly protein ComGB	-
P3U43_RS06700 (P3U43_06700)	comGC	1346803..1347120 (+)	318	WP_070045385.1	competence type IV pilus major pilin ComGC	Machinery gene
P3U43_RS06705 (P3U43_06705)	comGD	1347120..1347548 (+)	429	WP_017000239.1	competence type IV pilus minor pilin ComGD	-
P3U43_RS06710 (P3U43_06710)	comGE	1347532..1347807 (+)	276	WP_017000240.1	competence type IV pilus minor pilin ComGE	-
P3U43_RS06715 (P3U43_06715)	comGF	1347821..1348216 (+)	396	WP_320424674.1	competence type IV pilus minor pilin ComGF	-
P3U43_RS06720 (P3U43_06720)	-	1348452..1348970 (+)	519	WP_017000243.1	shikimate kinase	-
P3U43_RS06725 (P3U43_06725)	gcvT	1349133..1350221 (+)	1089	WP_017000244.1	glycine cleavage system aminomethyltransferase GcvT	-
P3U43_RS06730 (P3U43_06730)	gcvPA	1350233..1351576 (+)	1344	WP_017000245.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-

Sequence

Protein

• Length: 105 a.a.
• Molecular weight: 11590.66 Da
• Isoelectric Point: 7.8266

>NTDB_id=802426 P3U43_RS06700 WP_070045385.1 1346803..1347120(+) (comGC) [Mammaliicoccus lentus strain Dog127_L]
MKNIKFFKKEEGFTLIEMLIVLLIISILLIIIIPNISKQSETVKSTGCQAQVKMVAGQVEAYTLKHDAKPNSINDLVSDG
FIKENQLTCKSGQNIVLNNGEVVAQ

Nucleotide

• Length: 318 bp

>NTDB_id=802426 P3U43_RS06700 WP_070045385.1 1346803..1347120(+) (comGC) [Mammaliicoccus lentus strain Dog127_L]
ATGAAAAATATAAAGTTTTTTAAAAAAGAAGAAGGCTTCACGTTGATTGAGATGTTAATCGTATTATTAATTATAAGTAT
TTTACTTATAATTATAATCCCTAACATAAGCAAGCAGTCTGAAACCGTGAAAAGTACTGGTTGTCAGGCACAAGTTAAAA
TGGTTGCTGGCCAAGTAGAAGCATATACATTAAAACACGATGCTAAGCCAAATTCAATTAATGATTTAGTAAGTGATGGG
TTCATAAAAGAGAATCAATTGACTTGTAAATCTGGTCAGAACATTGTTTTAAATAACGGAGAAGTAGTAGCTCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (8-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	66.337	96.19	0.638
comGC	Staphylococcus aureus N315	66.337	96.19	0.638
comGC	Bacillus subtilis subsp. subtilis str. 168	46.237	88.571	0.41
comGC/cglC	Streptococcus mitis NCTC 12261	40.952	100	0.41
comGC/cglC	Streptococcus mitis SK321	43.299	92.381	0.4
comGC/cglC	Streptococcus pneumoniae R6	44.828	82.857	0.371
comGC/cglC	Streptococcus pneumoniae TIGR4	44.828	82.857	0.371
comGC/cglC	Streptococcus pneumoniae Rx1	44.828	82.857	0.371
comGC/cglC	Streptococcus pneumoniae D39	44.828	82.857	0.371
comYC	Streptococcus mutans UA159	50.649	73.333	0.371
comYC	Streptococcus mutans UA140	50.649	73.333	0.371
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	78.095	0.362