Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   RI106_RS01490 Genome accession   NZ_CP134071
Coordinates   262233..263507 (-) Length   424 a.a.
NCBI ID   WP_045173851.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 4233     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 257233..268507
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RI106_RS01475 (RI106_01475) - 259518..259610 (+) 93 WP_001789987.1 hypothetical protein -
  RI106_RS01480 (RI106_01480) - 259590..260495 (-) 906 WP_000184370.1 transglycosylase domain-containing protein -
  RI106_RS01485 (RI106_01485) tyrS 260877..262139 (+) 1263 WP_000186029.1 tyrosine--tRNA ligase -
  RI106_RS01490 (RI106_01490) htrA 262233..263507 (-) 1275 WP_045173851.1 S1C family serine protease Regulator
  RI106_RS01495 (RI106_01495) - 263679..264296 (+) 618 WP_000287588.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  RI106_RS01500 (RI106_01500) nagE 264424..265890 (+) 1467 WP_000276363.1 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  RI106_RS01505 (RI106_01505) - 265997..267127 (+) 1131 WP_045173854.1 HAD family hydrolase -
  RI106_RS01510 (RI106_01510) - 267088..267183 (-) 96 WP_031761395.1 hypothetical protein -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 45851.07 Da        Isoelectric Point: 10.0072

>NTDB_id=802365 RI106_RS01490 WP_045173851.1 262233..263507(-) (htrA) [Staphylococcus aureus strain 4233]
MSDFNHTDHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSK
KFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDREDGIYVAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQ
KEQPKRQSRSERQSPGQGYRDFFR

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=802365 RI106_RS01490 WP_045173851.1 262233..263507(-) (htrA) [Staphylococcus aureus strain 4233]
ATGTCAGATTTTAATCATACAGATCATTCTACAACAAACCATAGCCAAACACCTAGATACAGAAGACCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTGCTGGAATTATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTTCAGACAACAAATAATAAAGGTGGCAATCAATTAGACGGTCAAAGCAAG
AAATTCGGTACCGTTCATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTTATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCTGGAGTAGGTTCAGGTGTTATCTATCAAATAAACA
ACAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATGGCGCAAATGAAATTAGAGTCCAATTACATAATAAAAAA
CAAGTTAAAGCGAAATTAGTTGGTAAAGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACAAAAGGTATTAA
AGCGATTCAATTTGCCAACTCTTCAAAAGTACAAACTGGCGATAGCGTATTCGCAATGGGTAACCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGCGAACGTACGATTGACGCTGAGACAACTGGTGGCAATACAAAA
GTTAGCGTTCTTCAAACAGATGCTGCTATTAACCCAGGTAACTCAGGTGGCGCATTAGTAGATATTAATGGTAATTTAGT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATCGGGTTTGCTATTCCAAGTAATGAAGTTAAAGTAA
CAATTGAACAACTTGTAAAACATGGTAAAATTGACCGCCCTTCGATTGGTATTGGTTTAATTAATTTGAAAGATATTCCT
GAAGAAGAGCGCGAGCAACTTCATACTGATAGAGAAGACGGTATTTATGTCGCCAAAGCTGATAGTGATATTGATCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAACCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACAAAAGAAGTTAAAGTGAAATTAAAACAACAA
AAAGAACAACCAAAACGTCAAAGCCGATCAGAACGTCAATCACCTGGCCAAGGCTATAGAGATTTCTTTAGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

39.055

94.811

0.37