Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   RIF20_RS11035 Genome accession   NZ_CP134068
Coordinates   2225081..2225884 (-) Length   267 a.a.
NCBI ID   WP_001134194.1    Uniprot ID   A0A0H2XEM8
Organism   Staphylococcus aureus strain 63     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 2220081..2230884
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RIF20_RS11010 (RIF20_11010) metG 2220378..2222351 (-) 1974 WP_001051132.1 methionine--tRNA ligase -
  RIF20_RS11015 (RIF20_11015) rsmI 2222636..2223475 (-) 840 WP_000279926.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  RIF20_RS11020 (RIF20_11020) - 2223477..2223725 (-) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  RIF20_RS11025 (RIF20_11025) - 2223718..2224443 (-) 726 WP_000910687.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  RIF20_RS11030 (RIF20_11030) yabA 2224717..2225064 (-) 348 WP_000375686.1 DNA replication initiation control protein YabA -
  RIF20_RS11035 (RIF20_11035) yaaT 2225081..2225884 (-) 804 WP_001134194.1 stage 0 sporulation family protein Regulator
  RIF20_RS11040 (RIF20_11040) - 2225885..2226811 (-) 927 WP_000344340.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  RIF20_RS11045 (RIF20_11045) - 2227025..2227354 (-) 330 WP_000781979.1 cyclic-di-AMP receptor -
  RIF20_RS11050 (RIF20_11050) tmk 2227382..2227999 (-) 618 WP_001272126.1 dTMP kinase -
  RIF20_RS11055 (RIF20_11055) - 2228001..2229338 (-) 1338 WP_000812832.1 aminotransferase class V-fold PLP-dependent enzyme -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30232.89 Da        Isoelectric Point: 4.5801

>NTDB_id=802303 RIF20_RS11035 WP_001134194.1 2225081..2225884(-) (yaaT) [Staphylococcus aureus strain 63]
MPNVIGVQFQKAGKLEYYTPNDIQVDIEDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRIADDKDIDKFNCNER
DAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=802303 RIF20_RS11035 WP_001134194.1 2225081..2225884(-) (yaaT) [Staphylococcus aureus strain 63]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGATAT
AGAAGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCTCTTAAAAATATTATTCGCATTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGA
GATGCTGAAAATGCATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTTAATTTTACGGCGGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCAAATTGCTTGGCGGTATCGGACCT
TGTGGTAGGTCGTTATGTTGTTCTACATTTTTAGGGGATTTTGAACCAGTATCGATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCTGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTATTATGAGG
AAGTACGTGCACAATTACCTGATATTGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACATGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XEM8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

62.357

98.502

0.614