Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   Q2K21_RS28515 Genome accession   NZ_CP134053
Coordinates   6488930..6490858 (+) Length   642 a.a.
NCBI ID   WP_310776483.1    Uniprot ID   A0ABV7SKM8
Organism   Streptomyces sp. CGMCC 4.7035     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 6483930..6495858
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q2K21_RS28500 (Q2K21_28500) - 6485051..6485353 (+) 303 WP_310776477.1 YtxH domain-containing protein -
  Q2K21_RS28505 (Q2K21_28505) - 6485503..6486957 (+) 1455 WP_310776479.1 FGGY family carbohydrate kinase -
  Q2K21_RS28510 (Q2K21_28510) rcrP 6487197..6488930 (+) 1734 WP_310776481.1 ABC transporter ATP-binding protein Regulator
  Q2K21_RS28515 (Q2K21_28515) rcrQ 6488930..6490858 (+) 1929 WP_310776483.1 ABC transporter ATP-binding protein Regulator
  Q2K21_RS28520 (Q2K21_28520) - 6490900..6492192 (-) 1293 WP_310776485.1 RNA polymerase sigma factor -
  Q2K21_RS28525 (Q2K21_28525) - 6492347..6492688 (+) 342 WP_310776487.1 hypothetical protein -
  Q2K21_RS28530 (Q2K21_28530) dnaG 6492701..6494605 (-) 1905 WP_310776489.1 DNA primase -

Sequence

Protein


Download         Length: 642 a.a.        Molecular weight: 69565.02 Da        Isoelectric Point: 6.2695

>NTDB_id=802035 Q2K21_RS28515 WP_310776483.1 6488930..6490858(+) (rcrQ) [Streptomyces sp. CGMCC 4.7035]
MAGPMGRMMAGGGPDQRSMDFKGSGKRLLAQFKPERGTMYAMLVTCVLSVGLSVIGPKILGKATDLVFAGIIGRQMPSGA
TKEQVLDSMRKRGEGGVADMLSGTDFTPGKGIDFGAVGNVLLYALGAFVLAGLLMAVATRLSNRAINRTVYRLREDVQAK
LSRLPLSYFDKRQRGEVLSRATNDIDNIGQTLQQSLGQLINSLLTIVGVLAVMFWVSWLLALVALVTVPLSFVVATRIGK
RSQPHFVQQWRTTGKLNAHIEEMYTGHTLVKVFGRQDESARQFAEQNEKLYEAGFKAQFNSGVMQPLMMFVSNLNYVLVA
VVGGLRVASGALSIGDVQAFIQYSRQFSMPLTQVASMANLVQSGVASAERIFELLDAEEQESDPEAAVRPEELHGRVALE
NVSFRYDPEKPLIEDLSLKVEPGHTVAIVGPTGAGKTTLVNLLMRFYEVTGGRITLDGVDIAKMSRDELRAAIGMVLQDT
WLFGGTIAENIAYGAAREVTRGEIEEAARAAHADRFIRTLPDGYDTVIDDEGTGVSAGEKQLITIARAFLSDPVILVLDE
ATSSVDTRTEVLIQKAMAKLAHGRTSFVIAHRLSTIRDADTILVMENGSIVEQGSHTELLAADGAYARLYKAQFAQAVAE
VD

Nucleotide


Download         Length: 1929 bp        

>NTDB_id=802035 Q2K21_RS28515 WP_310776483.1 6488930..6490858(+) (rcrQ) [Streptomyces sp. CGMCC 4.7035]
ATGGCCGGGCCCATGGGACGCATGATGGCCGGGGGCGGCCCCGACCAGCGCTCGATGGACTTCAAGGGGTCCGGAAAACG
GCTCCTCGCCCAGTTCAAGCCCGAACGCGGCACGATGTACGCGATGCTGGTCACCTGTGTGCTGAGCGTCGGTCTCTCCG
TGATCGGACCGAAGATCCTCGGCAAGGCGACCGACCTGGTCTTCGCCGGGATCATCGGCCGTCAGATGCCGTCGGGGGCG
ACCAAGGAGCAGGTCCTCGACTCCATGCGCAAGCGGGGCGAGGGCGGCGTCGCCGACATGCTCTCCGGCACGGACTTCAC
CCCGGGCAAGGGCATCGACTTCGGCGCCGTGGGGAACGTCCTGCTGTACGCGCTCGGCGCGTTCGTCCTGGCCGGCCTGC
TCATGGCGGTGGCCACCCGGCTCTCCAACCGGGCCATCAACCGGACCGTCTACCGGTTGCGCGAGGACGTACAGGCGAAG
CTGTCGCGGCTTCCGCTGTCGTACTTCGACAAGCGGCAGCGCGGCGAGGTGCTCAGCCGCGCCACCAACGACATCGACAA
CATCGGGCAGACACTCCAGCAGTCGCTGGGCCAGCTCATCAACTCGCTGCTGACGATCGTGGGCGTGCTGGCGGTGATGT
TCTGGGTGTCGTGGCTGCTGGCGCTGGTGGCGCTGGTGACCGTGCCGCTCTCGTTCGTCGTGGCCACGCGGATCGGCAAG
CGCTCGCAGCCGCACTTCGTGCAGCAGTGGCGCACCACCGGCAAGCTGAACGCGCACATCGAGGAGATGTACACCGGGCA
CACGCTGGTGAAGGTGTTCGGGCGTCAGGACGAGTCGGCGCGGCAGTTCGCCGAGCAGAACGAGAAGCTGTACGAGGCCG
GGTTCAAGGCGCAGTTCAACAGCGGTGTGATGCAGCCGCTGATGATGTTCGTGTCGAACCTGAACTATGTGCTGGTGGCC
GTGGTCGGTGGTCTGCGGGTCGCGTCCGGTGCGCTGTCCATCGGCGACGTGCAGGCCTTCATCCAGTACTCGCGGCAGTT
CTCGATGCCGCTGACGCAGGTCGCGTCGATGGCGAACCTGGTGCAGTCGGGTGTCGCCTCGGCGGAGCGGATCTTCGAGC
TGCTGGACGCAGAGGAACAGGAGTCCGACCCCGAGGCCGCGGTGCGGCCGGAGGAGCTGCACGGACGGGTCGCGCTGGAA
AACGTGTCGTTCCGGTACGACCCCGAGAAGCCGCTCATCGAGGACCTGTCGCTGAAGGTGGAGCCGGGGCACACGGTCGC
GATCGTCGGCCCGACGGGCGCGGGCAAGACGACCCTCGTCAACCTGCTGATGCGGTTCTACGAGGTCACCGGCGGGCGGA
TCACGCTCGACGGGGTCGACATCGCGAAGATGTCCCGGGACGAACTGCGGGCCGCGATCGGGATGGTGCTCCAGGACACC
TGGCTGTTCGGGGGCACGATCGCGGAGAACATCGCGTACGGGGCCGCGCGCGAGGTCACCCGCGGGGAGATCGAGGAGGC
AGCGCGGGCGGCGCACGCGGACCGGTTCATCCGGACGCTGCCGGACGGCTACGACACCGTGATCGACGACGAGGGCACGG
GGGTCAGCGCGGGTGAGAAGCAGCTCATCACGATCGCGCGGGCGTTCCTGTCCGACCCGGTGATCCTGGTTCTGGACGAG
GCGACGAGTTCGGTGGACACCCGGACCGAGGTGCTGATCCAGAAGGCGATGGCGAAGCTGGCGCACGGGCGGACGTCGTT
CGTGATCGCCCATCGCCTGTCGACGATCCGGGACGCGGACACGATCCTGGTGATGGAGAACGGGTCCATCGTCGAGCAGG
GTTCGCACACCGAACTGCTGGCCGCCGACGGGGCGTACGCGCGGCTGTACAAGGCGCAGTTCGCCCAGGCGGTGGCCGAG
GTCGACTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(414-563)

ABC transporter transmembrane region (ABC_membrane)

(57-351)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

41.519

96.417

0.4