Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   Q2K21_RS28510 Genome accession   NZ_CP134053
Coordinates   6487197..6488930 (+) Length   577 a.a.
NCBI ID   WP_310776481.1    Uniprot ID   A0ABV7SNC6
Organism   Streptomyces sp. CGMCC 4.7035     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 6482197..6493930
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q2K21_RS28480 (Q2K21_28480) - 6482452..6484326 (+) 1875 WP_310776475.1 protein kinase domain-containing protein -
  Q2K21_RS28500 (Q2K21_28500) - 6485051..6485353 (+) 303 WP_310776477.1 YtxH domain-containing protein -
  Q2K21_RS28505 (Q2K21_28505) - 6485503..6486957 (+) 1455 WP_310776479.1 FGGY family carbohydrate kinase -
  Q2K21_RS28510 (Q2K21_28510) rcrP 6487197..6488930 (+) 1734 WP_310776481.1 ABC transporter ATP-binding protein Regulator
  Q2K21_RS28515 (Q2K21_28515) rcrQ 6488930..6490858 (+) 1929 WP_310776483.1 ABC transporter ATP-binding protein Regulator
  Q2K21_RS28520 (Q2K21_28520) - 6490900..6492192 (-) 1293 WP_310776485.1 RNA polymerase sigma factor -
  Q2K21_RS28525 (Q2K21_28525) - 6492347..6492688 (+) 342 WP_310776487.1 hypothetical protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62655.85 Da        Isoelectric Point: 6.5076

>NTDB_id=802034 Q2K21_RS28510 WP_310776481.1 6487197..6488930(+) (rcrP) [Streptomyces sp. CGMCC 4.7035]
MLIRLLRAHLRPYKKPISLLVLLQFLQTCATLYLPTLNAHIIDKGVVKGDTDYILSFGGLMIGVSLGQVICNMGAVYYGA
RTASAIGRDVRAAVFDRVQSFSSREVGHFGAPSLITRTTNDVQQVQMLALMTFTLMVSAPIMCVGGIVLALGLDVPLSGV
LVAVVPVLGICVTLIVRRLRPLFRTMQVRLDTVNRVLREQISGNRVIRAFVRDDYEKDRFKGANTELTEVSLGTGRTLAL
MFPLVMTVVNLSSIAVVWFGAHRIDSGGMQIGDLTAFLAYLMQIVMSVMMATFMFMMVPRAEVCAERISEVLDTESSVVP
PTAPVVELRRHGHLEIRDAGFRYPGAEEPVLKAIDVVARPGETTAVIGSTGSGKSTLLGLVPRLFDATEGEVLVDGVNVN
EIDPKLLAKTVGLVPQKPYLFAGTVATNLRYGNPDATDEELWHALEVAQAKGFVEALENGLHSPIAQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRAALSQETAEATVVIVAQRVATIRDADRILVLDEGRVVGTGRHHELMATN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=802034 Q2K21_RS28510 WP_310776481.1 6487197..6488930(+) (rcrP) [Streptomyces sp. CGMCC 4.7035]
GTGCTCATACGACTTCTGAGGGCCCACCTGCGCCCGTACAAGAAACCCATCAGCCTGCTGGTGCTGCTGCAGTTCCTGCA
GACCTGCGCCACGCTCTATCTGCCCACGCTCAACGCGCACATCATCGACAAGGGTGTTGTGAAGGGGGACACGGATTACA
TCCTGTCCTTCGGCGGCCTGATGATCGGGGTCTCTCTCGGCCAGGTCATCTGCAACATGGGCGCCGTCTACTACGGCGCC
CGTACCGCGTCGGCCATCGGCCGGGACGTCCGGGCCGCCGTCTTCGACCGGGTGCAGTCGTTCTCCTCGCGTGAGGTGGG
TCACTTCGGGGCGCCGTCGCTGATCACCCGCACCACGAACGACGTGCAGCAGGTGCAGATGCTCGCCCTGATGACGTTCA
CCCTGATGGTGTCGGCGCCGATCATGTGCGTGGGCGGCATCGTCCTGGCGCTCGGTCTGGACGTGCCGCTGTCCGGCGTT
CTGGTCGCCGTGGTGCCGGTGCTCGGCATCTGCGTGACGCTGATCGTGCGCCGGCTGCGGCCGCTGTTCCGCACCATGCA
GGTCCGCCTGGACACGGTGAACCGGGTGCTGCGCGAGCAGATCTCCGGCAACCGCGTCATCCGCGCCTTCGTCCGGGACG
ACTACGAGAAGGACCGCTTCAAGGGCGCCAACACCGAGCTCACCGAGGTGTCCCTCGGTACCGGCCGCACGCTGGCGCTG
ATGTTCCCCCTGGTGATGACCGTGGTGAACCTCTCCTCGATCGCCGTGGTCTGGTTCGGCGCGCACCGCATCGACAGCGG
CGGCATGCAGATCGGCGACCTGACCGCGTTCCTCGCCTACCTCATGCAGATCGTGATGTCCGTCATGATGGCCACCTTCA
TGTTCATGATGGTGCCCCGCGCGGAGGTCTGCGCCGAGCGCATCTCGGAGGTGCTCGACACCGAGTCGAGCGTCGTACCG
CCCACCGCGCCCGTCGTCGAGCTGCGGCGCCACGGCCATCTGGAGATCCGTGACGCCGGTTTCCGCTATCCGGGTGCCGA
GGAGCCGGTTCTCAAGGCCATCGACGTGGTGGCGCGGCCCGGCGAGACCACGGCCGTCATCGGGTCCACCGGCAGCGGCA
AGTCGACCCTGCTCGGGCTTGTCCCCCGCCTCTTCGACGCCACCGAGGGCGAGGTGCTCGTGGACGGCGTGAACGTCAAC
GAGATCGACCCGAAGCTGCTGGCGAAGACGGTCGGGCTCGTGCCGCAGAAGCCGTACCTGTTCGCGGGCACGGTCGCCAC
CAACCTGCGGTACGGCAATCCGGACGCGACCGACGAGGAGCTGTGGCACGCGCTGGAGGTGGCGCAGGCCAAGGGGTTCG
TCGAGGCGCTGGAGAACGGCCTCCACTCCCCCATCGCCCAGGGCGGTACGAACGTCTCCGGCGGGCAGCGGCAGCGCCTC
GCGATCGCGCGCACCCTCGTCCAGCGCCCGGAGATCTACCTCTTCGACGACTCCTTCTCGGCACTGGACTACGCGACCGA
CGCGGCCCTGCGCGCGGCGCTTTCGCAGGAGACCGCCGAGGCGACCGTGGTGATCGTCGCACAGCGCGTGGCGACCATCC
GGGACGCCGACCGGATCCTGGTCCTGGACGAGGGCCGGGTCGTCGGCACCGGCCGCCACCACGAGCTGATGGCAACCAAC
GAGACCTACCGGGAGATCGTGCTCTCCCAGCTCACGGAAGCGGAGGCTGCCTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(19-288)

ABC transporter (ABC_tran)

(351-498)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

40.426

97.747

0.395