Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   Q2K21_RS00615 Genome accession   NZ_CP134053
Coordinates   147974..148582 (-) Length   202 a.a.
NCBI ID   WP_310763070.1    Uniprot ID   A0ABV7SAS9
Organism   Streptomyces sp. CGMCC 4.7035     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 142974..153582
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q2K21_RS00605 (Q2K21_00605) - 143051..145630 (+) 2580 WP_310763068.1 hypothetical protein -
  Q2K21_RS00610 (Q2K21_00610) - 145778..147811 (+) 2034 WP_310763069.1 histidine kinase -
  Q2K21_RS00615 (Q2K21_00615) vraR 147974..148582 (-) 609 WP_310763070.1 response regulator transcription factor Regulator
  Q2K21_RS00620 (Q2K21_00620) - 148703..149434 (+) 732 WP_310763071.1 ABC transporter ATP-binding protein -
  Q2K21_RS00625 (Q2K21_00625) - 149434..151890 (+) 2457 WP_310763072.1 FtsX-like permease family protein -
  Q2K21_RS00630 (Q2K21_00630) - 151884..152702 (-) 819 WP_310763073.1 class F sortase -

Sequence

Protein


Download         Length: 202 a.a.        Molecular weight: 21585.97 Da        Isoelectric Point: 5.1096

>NTDB_id=801968 Q2K21_RS00615 WP_310763070.1 147974..148582(-) (vraR) [Streptomyces sp. CGMCC 4.7035]
MIRVLLAEDQHIIRGALAALLGLEEDIEVVATVDSGTAAVDAARVYEPDVAVLDIDMPGTMDGLEAAAVLREKLPRCRVL
MLTAYGKPGHLRRALGARVDGFVLKTAPPEELVAAIRKVAAGERVLDPSLAVTAWDLADNPLTPRETEVLRLVAGGAEAT
EIARQVHLTAGTVRNYLTAIVTKLNARNRTDAVRIATEAGWI

Nucleotide


Download         Length: 609 bp        

>NTDB_id=801968 Q2K21_RS00615 WP_310763070.1 147974..148582(-) (vraR) [Streptomyces sp. CGMCC 4.7035]
GTGATACGGGTGCTTCTGGCGGAGGATCAGCACATCATCAGGGGGGCGCTGGCAGCGCTGCTCGGCCTGGAGGAGGACAT
CGAGGTCGTCGCCACCGTCGACTCCGGCACCGCGGCCGTGGACGCGGCCAGGGTCTACGAACCGGACGTCGCCGTGCTCG
ACATCGACATGCCGGGAACGATGGACGGGCTGGAGGCGGCGGCCGTACTGCGCGAGAAACTGCCGCGTTGCCGGGTGCTG
ATGCTCACCGCGTACGGAAAGCCCGGACACCTGCGCCGGGCGCTCGGCGCGCGGGTCGACGGGTTCGTACTGAAGACAGC
GCCGCCGGAGGAACTGGTCGCCGCCATCCGGAAAGTGGCAGCGGGCGAGCGGGTGCTCGACCCCTCGCTCGCGGTCACCG
CGTGGGATCTGGCCGACAATCCGCTCACGCCTCGTGAGACCGAGGTGCTCCGGCTGGTGGCGGGAGGTGCGGAGGCCACC
GAGATCGCGCGACAGGTCCACCTCACGGCGGGGACGGTCCGCAACTACCTCACGGCCATCGTCACCAAGCTCAACGCCCG
CAACCGCACGGACGCGGTCCGTATCGCGACGGAGGCGGGCTGGATCTAG

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, luxR family (GerE)

(141-196)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

35.266

100

0.361