Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   RE424_RS10070 Genome accession   NZ_CP134047
Coordinates   2011638..2012456 (-) Length   272 a.a.
NCBI ID   WP_103254208.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 21SAU_AGRO3     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2006638..2017456
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RE424_RS10050 - 2007731..2008708 (+) 978 WP_000379098.1 metal-dependent hydrolase -
  RE424_RS10055 - 2008969..2009805 (-) 837 WP_000886456.1 hypothetical protein -
  RE424_RS10060 - 2009814..2011331 (-) 1518 WP_000535834.1 ABC transporter ATP-binding protein -
  RE424_RS10065 - 2011346..2011660 (-) 315 WP_000435806.1 YfhH family protein -
  RE424_RS10070 recX 2011638..2012456 (-) 819 WP_103254208.1 recombination regulator RecX Regulator
  RE424_RS10075 sgtB 2012717..2013526 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  RE424_RS10080 - 2013865..2014380 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  RE424_RS10085 - 2014511..2014672 (-) 162 WP_001005407.1 SE1561 family protein -
  RE424_RS10090 yfkAB 2014896..2016047 (+) 1152 WP_023914843.1 radical SAM/CxCxxxxC motif protein YfkAB -
  RE424_RS10095 - 2016307..2016837 (-) 531 WP_000184383.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32244.13 Da        Isoelectric Point: 6.7487

>NTDB_id=801950 RE424_RS10070 WP_103254208.1 2011638..2012456(-) (recX) [Staphylococcus aureus strain 21SAU_AGRO3]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAKSLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEGVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=801950 RE424_RS10070 WP_103254208.1 2011638..2012456(-) (recX) [Staphylococcus aureus strain 21SAU_AGRO3]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAACAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGAAAAGTTTAAAGAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGGGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

98.897

100

0.989