Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   RE424_RS00120 Genome accession   NZ_CP134047
Coordinates   29454..30254 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain 21SAU_AGRO3     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 24454..35254
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RE424_RS00105 walK 25122..26948 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  RE424_RS00110 yycH 26941..28275 (+) 1335 WP_001060131.1 two-component system activity regulator YycH -
  RE424_RS00115 - 28276..29064 (+) 789 WP_001104172.1 two-component system regulatory protein YycI -
  RE424_RS00120 vicX 29454..30254 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  RE424_RS00125 adsA 30481..32799 (+) 2319 WP_000645749.1 LPXTG-anchored adenosine synthase AdsA -
  RE424_RS00130 rlmH 33168..33647 (+) 480 WP_023914385.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  RE424_RS00135 - 33753..33899 (+) 147 WP_023914387.1 hypothetical protein -
  RE424_RS00140 - 33892..35076 (+) 1185 WP_023914389.1 restriction endonuclease subunit S -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=801880 RE424_RS00120 WP_000088649.1 29454..30254(+) (vicX) [Staphylococcus aureus strain 21SAU_AGRO3]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=801880 RE424_RS00120 WP_000088649.1 29454..30254(+) (vicX) [Staphylococcus aureus strain 21SAU_AGRO3]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGAAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTGACGGATACGGGTTACGTGTCGGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAATACGA
AACGTATTTACCTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGTTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474