Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | L6483_RS09925 | Genome accession | NZ_AP022952 |
| Coordinates | 1939408..1939695 (+) | Length | 95 a.a. |
| NCBI ID | WP_000648330.1 | Uniprot ID | A0AAE9P9A9 |
| Organism | Bacillus cereus strain J39 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1934408..1944695
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6483_RS09905 (BCJMU39_1889) | - | 1935582..1935779 (+) | 198 | WP_062921548.1 | DUF4083 domain-containing protein | - |
| L6483_RS09910 (BCJMU39_1890) | - | 1935811..1936272 (+) | 462 | WP_000035009.1 | NUDIX hydrolase | - |
| L6483_RS09915 (BCJMU39_1891) | nadE | 1936321..1937139 (-) | 819 | WP_062921549.1 | ammonia-dependent NAD(+) synthetase | - |
| L6483_RS09920 (BCJMU39_1892) | - | 1937411..1939291 (+) | 1881 | WP_236788246.1 | ABC transporter permease | - |
| L6483_RS09925 (BCJMU39_1893) | abrB | 1939408..1939695 (+) | 288 | WP_000648330.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| L6483_RS09930 (BCJMU39_1894) | - | 1939970..1940920 (+) | 951 | WP_001089035.1 | serine protease | - |
| L6483_RS09935 (BCJMU39_1895) | - | 1940961..1941269 (-) | 309 | WP_001259894.1 | helix-turn-helix transcriptional regulator | - |
| L6483_RS09940 (BCJMU39_1896) | - | 1941377..1942312 (+) | 936 | WP_062921551.1 | aldo/keto reductase | - |
| L6483_RS09945 (BCJMU39_1897) | - | 1942361..1943536 (+) | 1176 | WP_062921552.1 | MFS transporter | - |
| L6483_RS09950 (BCJMU39_1898) | - | 1943726..1943950 (-) | 225 | WP_000162606.1 | hypothetical protein | - |
| L6483_RS09955 (BCJMU39_1899) | - | 1944035..1944382 (-) | 348 | WP_000426313.1 | DUF4257 domain-containing protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10617.34 Da Isoelectric Point: 6.3179
>NTDB_id=80146 L6483_RS09925 WP_000648330.1 1939408..1939695(+) (abrB) [Bacillus cereus strain J39]
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSNQNISLANGNITVSIDGAK
YLIKEIEKFLNKSEA
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSNQNISLANGNITVSIDGAK
YLIKEIEKFLNKSEA
Nucleotide
Download Length: 288 bp
>NTDB_id=80146 L6483_RS09925 WP_000648330.1 1939408..1939695(+) (abrB) [Bacillus cereus strain J39]
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAATTACGTGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTCGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAAATCAAAACATATCATTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
TATTTAATAAAAGAAATAGAGAAGTTTTTAAACAAGAGTGAGGCTTAG
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAATTACGTGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTCGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAAATCAAAACATATCATTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
TATTTAATAAAAGAAATAGAGAAGTTTTTAAACAAGAGTGAGGCTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
54.444 |
94.737 |
0.516 |