Detailed information NTG0080142

Bioinformatically predicted

Overview

• Name: sinR
• Type: Regulator
• Locus tag: L6483_RS06600
• Genome accession: NZ_AP022952
• Coordinates: 1275250..1275573 (-)
• Length: 107 a.a.
• NCBI ID: WP_236787872.1
• Uniprot ID: -
• Organism: Bacillus cereus strain J39
• Function: repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation

Genomic Context

Location: 1270250..1280573

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6483_RS06575 (BCJMU39_1217)	-	1270582..1271868 (+)	1287	WP_236787853.1	D-alanyl-D-alanine carboxypeptidase family protein	-
L6483_RS06580 (BCJMU39_1218)	-	1272061..1272630 (+)	570	WP_000767813.1	signal peptidase I	-
L6483_RS06585 (BCJMU39_1219)	-	1272693..1273280 (+)	588	WP_062921647.1	CalY family protein	-
L6483_RS06590 (BCJMU39_1220)	-	1273444..1274307 (+)	864	WP_236787861.1	DUF4047 domain-containing protein	-
L6483_RS06595 (BCJMU39_1221)	calY	1274581..1275174 (+)	594	WP_236787870.1	biofilm matrix protein CalY	-
L6483_RS06600 (BCJMU39_1222)	sinR	1275250..1275573 (-)	324	WP_236787872.1	helix-turn-helix domain-containing protein	Regulator
L6483_RS06605 (BCJMU39_1223)	-	1275653..1275787 (-)	135	WP_000276217.1	anti-repressor SinI family protein	-
L6483_RS06610 (BCJMU39_1224)	inhA1	1276131..1278518 (+)	2388	WP_236787874.1	immune inhibitor A domain-containing protein	-
L6483_RS06615 (BCJMU39_1225)	-	1278689..1280056 (+)	1368	WP_062921650.1	aldehyde dehydrogenase	-

Sequence

Protein

• Length: 107 a.a.
• Molecular weight: 12368.20 Da
• Isoelectric Point: 8.5404

>NTDB_id=80142 L6483_RS06600 WP_236787872.1 1275250..1275573(-) (sinR) [Bacillus cereus strain J39]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLF
KDAMNSGVSKEQFREFLEFTKWKQDQK

Nucleotide

• Length: 324 bp

>NTDB_id=80142 L6483_RS06600 WP_236787872.1 1275250..1275573(-) (sinR) [Bacillus cereus strain J39]
ATGATTGGAGAACGTATAAAACGCCTTCGCTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAGAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCTTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAGATCAAAA
ATAA

Domains

Predicted by InterproScan.

• Helix-turn-helix (HTH_3) (6-60)

• Anti-repressor SinI (SinI) (72-99)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sinR	Bacillus subtilis subsp. subtilis str. 168	66.972	100	0.682