Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   P3G59_RS27420 Genome accession   NZ_CP119967
Coordinates   6107788..6108192 (-) Length   134 a.a.
NCBI ID   WP_007913673.1    Uniprot ID   -
Organism   Pseudomonas sp. A34-9     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6102788..6113192
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3G59_RS27405 - 6104608..6106656 (-) 2049 WP_277759691.1 methyl-accepting chemotaxis protein -
  P3G59_RS27410 - 6106812..6107351 (-) 540 WP_064116258.1 chemotaxis protein CheW -
  P3G59_RS27415 pilH 6107362..6107727 (-) 366 WP_277759692.1 twitching motility response regulator PilH -
  P3G59_RS27420 pilG 6107788..6108192 (-) 405 WP_007913673.1 twitching motility response regulator PilG Regulator
  P3G59_RS27425 gshB 6108418..6109389 (+) 972 WP_007913671.1 glutathione synthase -
  P3G59_RS27430 - 6109497..6110396 (+) 900 WP_277759693.1 energy transducer TonB -
  P3G59_RS27435 - 6110532..6111104 (+) 573 WP_277759694.1 YqgE/AlgH family protein -
  P3G59_RS27440 ruvX 6111104..6111541 (+) 438 WP_064589634.1 Holliday junction resolvase RuvX -
  P3G59_RS27445 pyrR 6111622..6112128 (+) 507 WP_034153653.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  P3G59_RS27450 - 6112156..6113160 (+) 1005 WP_007913665.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14592.99 Da        Isoelectric Point: 7.1346

>NTDB_id=801261 P3G59_RS27420 WP_007913673.1 6107788..6108192(-) (pilG) [Pseudomonas sp. A34-9]
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=801261 P3G59_RS27420 WP_007913673.1 6107788..6108192(-) (pilG) [Pseudomonas sp. A34-9]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTCATCGACGACTCGAAAACGATTCGACGCACCGCCGAAACCTTATT
GAAGAATGTCGGGTGCGAAGTGATCACCGCGATCGACGGTTTCGACGCCCTGGCCAAGATCGCCGACAACCATCCCGGGA
TCATTTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCGTTCAAG
GCCACGCCGGTGATCATGCTGTCATCGCGTGACGGGCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCTGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAACGCGATTCAGGCCCATGTTCCGGGCTTCGCCGCCGTTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

93.284

0.701