Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | P3F89_RS26705 | Genome accession | NZ_CP119875 |
| Coordinates | 5166741..5169176 (-) | Length | 811 a.a. |
| NCBI ID | WP_000971179.1 | Uniprot ID | A0A063CE58 |
| Organism | Bacillus tropicus strain T36S-23 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 5161741..5174176
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P3F89_RS26685 (P3F89_26645) | ispD | 5162224..5162904 (-) | 681 | WP_000288291.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| P3F89_RS26690 (P3F89_26650) | - | 5162921..5164030 (-) | 1110 | WP_000919684.1 | PIN/TRAM domain-containing protein | - |
| P3F89_RS26695 (P3F89_26655) | disA | 5164191..5165264 (-) | 1074 | WP_000392168.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| P3F89_RS26700 (P3F89_26660) | radA | 5165268..5166644 (-) | 1377 | WP_001085212.1 | DNA repair protein RadA | Machinery gene |
| P3F89_RS26705 (P3F89_26665) | clpC | 5166741..5169176 (-) | 2436 | WP_000971179.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| P3F89_RS26710 (P3F89_26670) | - | 5169199..5170263 (-) | 1065 | WP_000050825.1 | protein arginine kinase | - |
| P3F89_RS26715 (P3F89_26675) | - | 5170268..5170816 (-) | 549 | WP_001979504.1 | UvrB/UvrC motif-containing protein | - |
| P3F89_RS26720 (P3F89_26680) | ctsR | 5170990..5171451 (-) | 462 | WP_001244563.1 | transcriptional regulator CtsR | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90530.34 Da Isoelectric Point: 6.4056
>NTDB_id=801235 P3F89_RS26705 WP_000971179.1 5166741..5169176(-) (clpC) [Bacillus tropicus strain T36S-23]
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
SFVIHSAEKVK
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
SFVIHSAEKVK
Nucleotide
Download Length: 2436 bp
>NTDB_id=801235 P3F89_RS26705 WP_000971179.1 5166741..5169176(-) (clpC) [Bacillus tropicus strain T36S-23]
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCGATTCGTATTGGGCATAA
CAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCGTTGATTGCTCTTG
GATTAAGTCCAGAGAAGGTTCAAAAAGAAGTAGAAGCGTTAATCGGACGCGGAACAGAAGCTTCTCAAACTGTACATTAT
ACACCGCGTGCTAAAAAGGTTATTGAGTTGTCTATGGATGAAGCCCGTAAATTAGGTCATTCTTACGTTGGAACAGAACA
TATTTTACTTGGTTTAATCCGCGAAGGTGAAGGGGTAGCAGCACGTGTTTTAAATAACTTAGGTGTTAGCTTAAATAAGG
CAAGACAACAAGTATTGCAACTTCTTGGAAGTAATGAAGCAAGTTCAGGTCATCAAGGTGGTTCTTCAACAAATGCAAAT
ACACCAACACTTGATAGCTTAGCGCGTGATTTAACAGTTGTTGCACGTGAAAATCGTTTAGACCCTGTTATTGGACGTGG
TAAAGAAATTCAACGTGTAATTGAGGTTTTAAGCCGTAGAACAAAAAACAATCCTGTATTAATTGGGGAGCCTGGTGTAG
GTAAAACGGCAATTGCAGAAGGATTAGCACAACAAATCGTAAATAATGAAGTTCCTGAAACTTTAAGAGATAAGCGTGTT
ATGACACTAGATATGGGTACAGTGGTAGCCGGAACGAAATACCGTGGTGAATTTGAAGACCGTTTGAAGAAAGTAATGGA
TGAAATCCGCCAAGCAGGAAATATCATTCTATTTATTGATGAACTTCATACATTAATTGGTGCAGGTGGAGCAGAAGGTG
CTATTGACGCATCGAACATTTTAAAACCATCTTTAGCTCGTGGGGAATTACAATGTATTGGGGCGACAACGTTAGATGAA
TACCGCAAATACATTGAAAAAGATGCAGCTTTAGAGAGACGTTTCCAACCAATTCACGTTGATGAGCCAAGTTTAGATGA
ATCAACTCAAATTTTAAAAGGTTTACGCGATCGTTATGAGGCACATCACCGCGTATCTATTACAGATGATGCAATTGATG
CAGCTGTAAAGCTTTCAGATCGTTATATTACAGATCGTTTCTTACCAGATAAAGCAATTGATTTAATTGATGAAGCTGCT
TCAAAGGTTCGCTTACGCTCTTATACAACACCACCAAATCTAAAAGAGCTTGAAGTGAAGCTTGAGGAAATTAGAAAAGA
AAAAGATGCAGCTGTACAAAGTCAAGAGTTTGAAAAAGCTGCTTCCTTACGTGATATGGAACAACGTTTACGTGAGAAGT
TAGAAGATACGAAGCGTCAATGGAAAGAGCAACAAGGAAAAGAAAACTCAGAAGTGACAGTAGAAGATATTGCAAATGTT
GTTTCTACGTGGACTCGTATCCCGGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAACTTAGAATCCATCCT
TCACGATCGTGTTATTGGTCAAGATGAAGCGGTAGTAGCTGTAGCAAAAGCTGTTCGCCGTGCTAGAGCAGGATTGAAAG
ATCCGAAACGTCCGATTGGCTCATTTATTTTCTTAGGGCCAACAGGTGTAGGTAAAACGGAGTTAGCAAGAGCGTTGGCA
GAATCTATGTTCGGTGATGAAGATGCAATGATTCGCATCGATATGTCTGAGTACATGGAGAAGCATTCTACTTCTCGCTT
AGTGGGATCTCCTCCGGGGTATGTTGGATATGAAGAAGGTGGACAATTAACAGAAAAAGTTCGCCGTAAGCCATATTCAG
TTGTCCTATTAGATGAAGTAGAGAAAGCTCATCCTGATGTGTTTAACATTTTACTACAAGTATTAGAAGATGGTCGCTTA
ACAGATTCTAAAGGACGTACAGTTGATTTCCGTAATACAATTGTTATTATGACATCTAACGTTGGTGCAGAGGCGTTAAA
ACGTAATAAACATCTTGGATTTAACGTACAAGATGAGAGCCGCGATTATTCAGATATGAAAGGTAAAGTAATGGATGAAC
TGAAAAAGGCATTCCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTGTTCCATATGCTTGAGAAAAAACATATT
CAAGAGATTGTAACACTTATGGTAAATCAGTTAGTAAATCGCTTAAAAGAGCAAGAAATTGAATTGCATTTAACAGAAGG
AGCAATTTCGGCTATTGCTGATAAAGGGTTTGACCGTGAGTACGGTGCTCGTCCGCTTCGTAGAGCAATTCAGAAACATG
TAGAAGATAGACTATCGGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTTGAAGGAGAA
TCATTTGTCATTCATAGTGCTGAAAAGGTAAAATAA
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCGATTCGTATTGGGCATAA
CAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCGTTGATTGCTCTTG
GATTAAGTCCAGAGAAGGTTCAAAAAGAAGTAGAAGCGTTAATCGGACGCGGAACAGAAGCTTCTCAAACTGTACATTAT
ACACCGCGTGCTAAAAAGGTTATTGAGTTGTCTATGGATGAAGCCCGTAAATTAGGTCATTCTTACGTTGGAACAGAACA
TATTTTACTTGGTTTAATCCGCGAAGGTGAAGGGGTAGCAGCACGTGTTTTAAATAACTTAGGTGTTAGCTTAAATAAGG
CAAGACAACAAGTATTGCAACTTCTTGGAAGTAATGAAGCAAGTTCAGGTCATCAAGGTGGTTCTTCAACAAATGCAAAT
ACACCAACACTTGATAGCTTAGCGCGTGATTTAACAGTTGTTGCACGTGAAAATCGTTTAGACCCTGTTATTGGACGTGG
TAAAGAAATTCAACGTGTAATTGAGGTTTTAAGCCGTAGAACAAAAAACAATCCTGTATTAATTGGGGAGCCTGGTGTAG
GTAAAACGGCAATTGCAGAAGGATTAGCACAACAAATCGTAAATAATGAAGTTCCTGAAACTTTAAGAGATAAGCGTGTT
ATGACACTAGATATGGGTACAGTGGTAGCCGGAACGAAATACCGTGGTGAATTTGAAGACCGTTTGAAGAAAGTAATGGA
TGAAATCCGCCAAGCAGGAAATATCATTCTATTTATTGATGAACTTCATACATTAATTGGTGCAGGTGGAGCAGAAGGTG
CTATTGACGCATCGAACATTTTAAAACCATCTTTAGCTCGTGGGGAATTACAATGTATTGGGGCGACAACGTTAGATGAA
TACCGCAAATACATTGAAAAAGATGCAGCTTTAGAGAGACGTTTCCAACCAATTCACGTTGATGAGCCAAGTTTAGATGA
ATCAACTCAAATTTTAAAAGGTTTACGCGATCGTTATGAGGCACATCACCGCGTATCTATTACAGATGATGCAATTGATG
CAGCTGTAAAGCTTTCAGATCGTTATATTACAGATCGTTTCTTACCAGATAAAGCAATTGATTTAATTGATGAAGCTGCT
TCAAAGGTTCGCTTACGCTCTTATACAACACCACCAAATCTAAAAGAGCTTGAAGTGAAGCTTGAGGAAATTAGAAAAGA
AAAAGATGCAGCTGTACAAAGTCAAGAGTTTGAAAAAGCTGCTTCCTTACGTGATATGGAACAACGTTTACGTGAGAAGT
TAGAAGATACGAAGCGTCAATGGAAAGAGCAACAAGGAAAAGAAAACTCAGAAGTGACAGTAGAAGATATTGCAAATGTT
GTTTCTACGTGGACTCGTATCCCGGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAACTTAGAATCCATCCT
TCACGATCGTGTTATTGGTCAAGATGAAGCGGTAGTAGCTGTAGCAAAAGCTGTTCGCCGTGCTAGAGCAGGATTGAAAG
ATCCGAAACGTCCGATTGGCTCATTTATTTTCTTAGGGCCAACAGGTGTAGGTAAAACGGAGTTAGCAAGAGCGTTGGCA
GAATCTATGTTCGGTGATGAAGATGCAATGATTCGCATCGATATGTCTGAGTACATGGAGAAGCATTCTACTTCTCGCTT
AGTGGGATCTCCTCCGGGGTATGTTGGATATGAAGAAGGTGGACAATTAACAGAAAAAGTTCGCCGTAAGCCATATTCAG
TTGTCCTATTAGATGAAGTAGAGAAAGCTCATCCTGATGTGTTTAACATTTTACTACAAGTATTAGAAGATGGTCGCTTA
ACAGATTCTAAAGGACGTACAGTTGATTTCCGTAATACAATTGTTATTATGACATCTAACGTTGGTGCAGAGGCGTTAAA
ACGTAATAAACATCTTGGATTTAACGTACAAGATGAGAGCCGCGATTATTCAGATATGAAAGGTAAAGTAATGGATGAAC
TGAAAAAGGCATTCCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTGTTCCATATGCTTGAGAAAAAACATATT
CAAGAGATTGTAACACTTATGGTAAATCAGTTAGTAAATCGCTTAAAAGAGCAAGAAATTGAATTGCATTTAACAGAAGG
AGCAATTTCGGCTATTGCTGATAAAGGGTTTGACCGTGAGTACGGTGCTCGTCCGCTTCGTAGAGCAATTCAGAAACATG
TAGAAGATAGACTATCGGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTTGAAGGAGAA
TCATTTGTCATTCATAGTGCTGAAAAGGTAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
85.926 |
99.877 |
0.858 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.5 |
98.644 |
0.498 |
| clpC | Streptococcus thermophilus LMD-9 |
45.969 |
100 |
0.471 |
| clpC | Streptococcus mutans UA159 |
44.881 |
100 |
0.465 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.476 |
100 |
0.465 |
| clpC | Streptococcus pneumoniae D39 |
46.675 |
98.274 |
0.459 |
| clpC | Streptococcus pneumoniae Rx1 |
46.675 |
98.274 |
0.459 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.375 |
98.644 |
0.457 |
| clpE | Streptococcus mutans UA159 |
53.538 |
80.148 |
0.429 |
| clpE | Streptococcus pneumoniae R6 |
52.705 |
79.778 |
0.42 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.705 |
79.778 |
0.42 |
| clpE | Streptococcus pneumoniae Rx1 |
52.705 |
79.778 |
0.42 |
| clpE | Streptococcus pneumoniae D39 |
52.705 |
79.778 |
0.42 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
51.893 |
78.175 |
0.406 |