Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   P3F89_RS21130 Genome accession   NZ_CP119875
Coordinates   4073227..4073403 (-) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus tropicus strain T36S-23     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 4068227..4078403
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3F89_RS21110 (P3F89_21075) - 4068855..4069601 (-) 747 WP_000966137.1 YjbA family protein -
  P3F89_RS21115 (P3F89_21080) - 4069745..4070533 (-) 789 WP_002194672.1 DUF2268 domain-containing protein -
  P3F89_RS21120 (P3F89_21085) fabF 4070640..4071878 (-) 1239 WP_002194671.1 beta-ketoacyl-ACP synthase II -
  P3F89_RS21125 (P3F89_21090) fabH 4071910..4072842 (-) 933 WP_001100541.1 beta-ketoacyl-ACP synthase III -
  P3F89_RS21130 (P3F89_21095) comZ 4073227..4073403 (-) 177 WP_009879752.1 ComZ family protein Regulator
  P3F89_RS21135 (P3F89_21100) - 4073457..4074329 (-) 873 WP_033691178.1 NAD(P)-dependent oxidoreductase -
  P3F89_RS21140 (P3F89_21105) - 4074359..4075093 (-) 735 WP_000028705.1 hypothetical protein -
  P3F89_RS21145 (P3F89_21110) - 4075250..4075432 (+) 183 WP_001211116.1 YjzD family protein -
  P3F89_RS21150 (P3F89_21115) - 4075684..4075887 (+) 204 WP_309573707.1 hypothetical protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=801225 P3F89_RS21130 WP_009879752.1 4073227..4073403(-) (comZ) [Bacillus tropicus strain T36S-23]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=801225 P3F89_RS21130 WP_009879752.1 4073227..4073403(-) (comZ) [Bacillus tropicus strain T36S-23]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAAGCTCAGCCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586