Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   P3F89_RS07420 Genome accession   NZ_CP119875
Coordinates   1403805..1404263 (-) Length   152 a.a.
NCBI ID   WP_000804871.1    Uniprot ID   A0A516QVQ1
Organism   Bacillus tropicus strain T36S-23     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1398805..1409263
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3F89_RS07390 (P3F89_07385) - 1398918..1400465 (-) 1548 WP_038356973.1 MDR family MFS transporter -
  P3F89_RS07395 (P3F89_07390) - 1400885..1401385 (+) 501 WP_002194043.1 hypothetical protein -
  P3F89_RS07400 (P3F89_07395) - 1401417..1401650 (-) 234 WP_033691462.1 SPP1 phage holin family protein -
  P3F89_RS07405 (P3F89_07400) - 1401815..1402456 (+) 642 WP_042514718.1 diguanylate cyclase domain-containing protein -
  P3F89_RS07410 (P3F89_07405) - 1402929..1403051 (+) 123 WP_002194041.1 hypothetical protein -
  P3F89_RS07415 (P3F89_07410) - 1403111..1403773 (+) 663 WP_002194040.1 YkyA family protein -
  P3F89_RS07420 (P3F89_07415) kre 1403805..1404263 (-) 459 WP_000804871.1 YkyB family protein Regulator
  P3F89_RS07425 (P3F89_07420) - 1404441..1405976 (+) 1536 WP_033691460.1 Ppx/GppA family phosphatase -
  P3F89_RS07430 (P3F89_07425) - 1406085..1408193 (+) 2109 WP_002194038.1 polyphosphate kinase -
  P3F89_RS07435 (P3F89_07430) - 1408368..1408604 (-) 237 WP_000283743.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17773.49 Da        Isoelectric Point: 10.6793

>NTDB_id=801209 P3F89_RS07420 WP_000804871.1 1403805..1404263(-) (kre) [Bacillus tropicus strain T36S-23]
MKPSQPQSQLQNQHSINRLAQSVFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=801209 P3F89_RS07420 WP_000804871.1 1403805..1404263(-) (kre) [Bacillus tropicus strain T36S-23]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTGTTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCGAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGCTTAATTACTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTCTCTAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGTTTA
GGTGATTACTTTTTCCATATTCCTCCTACAAAAGAAGATTTTCGAATCCTACCACATCTCGGTCATCTTGAATCCTCCTA
TCGAAACCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCGCTAAAAC
AAGAAAAAAAATTAAGTGAACCTGTCCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A516QVQ1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

65.517

76.316

0.5