Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   P2W74_RS14705 Genome accession   NZ_CP119862
Coordinates   3027505..3028116 (-) Length   203 a.a.
NCBI ID   WP_276292184.1    Uniprot ID   -
Organism   Citrobacter enshiensis strain S171     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3022505..3033116
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P2W74_RS14690 (P2W74_14690) helD 3022729..3024783 (-) 2055 WP_276292181.1 DNA helicase IV -
  P2W74_RS14695 (P2W74_14695) - 3024906..3025352 (+) 447 WP_276292182.1 YccF domain-containing protein -
  P2W74_RS14700 (P2W74_14700) yccS 3025371..3027524 (+) 2154 WP_276292183.1 YccS family putative transporter -
  P2W74_RS14705 (P2W74_14705) sxy/tfoX 3027505..3028116 (-) 612 WP_276292184.1 TfoX/Sxy family DNA transformation protein Regulator
  P2W74_RS14710 (P2W74_14710) sulA 3028333..3028842 (+) 510 WP_276292185.1 SOS-induced cell division inhibitor SulA -
  P2W74_RS14715 (P2W74_14715) ompA 3029197..3030243 (+) 1047 WP_276292186.1 porin OmpA -
  P2W74_RS14720 (P2W74_14720) matP 3030328..3030780 (-) 453 WP_276292187.1 macrodomain Ter protein MatP -
  P2W74_RS14725 (P2W74_14725) - 3030966..3032726 (+) 1761 WP_276292188.1 Lon protease family protein -

Sequence

Protein


Download         Length: 203 a.a.        Molecular weight: 23360.96 Da        Isoelectric Point: 9.5964

>NTDB_id=801156 P2W74_RS14705 WP_276292184.1 3027505..3028116(-) (sxy/tfoX) [Citrobacter enshiensis strain S171]
MRARSYGRIYKSQEYLASLGTIGYRSLFGSYSLSIGDTVFAMVANGELYLRACEQSVQYCVKHPPVWLTFMKRGRPVMLH
YYRVDESLWCDQQQLVRLSQYSLEAAVKEKNSRFSQHRLKDLPNMTFHLEILLNEAGIKDESTLRNLGAKMSWLRLRHLN
KSLTVKILYSLEGAILGVHEAALPAVRRQELADWVQSLTTEQG

Nucleotide


Download         Length: 612 bp        

>NTDB_id=801156 P2W74_RS14705 WP_276292184.1 3027505..3028116(-) (sxy/tfoX) [Citrobacter enshiensis strain S171]
ATGAGAGCGCGTTCTTATGGTCGAATCTATAAATCTCAAGAATACCTGGCTTCACTGGGCACGATTGGCTACCGCTCGCT
GTTTGGCAGTTACAGTTTGAGTATTGGGGATACTGTCTTTGCGATGGTCGCTAATGGGGAGTTATACCTTCGTGCCTGCG
AGCAAAGTGTACAGTATTGTGTGAAACATCCGCCTGTCTGGCTGACGTTTATGAAGCGTGGACGTCCGGTTATGCTCCAC
TATTATCGGGTGGATGAAAGCCTGTGGTGCGACCAGCAACAACTGGTGCGTTTGTCACAGTATTCACTGGAGGCGGCGGT
GAAGGAAAAAAACTCCCGCTTTTCGCAACATCGTCTGAAGGATTTACCCAACATGACCTTTCATCTGGAGATCCTTCTGA
ACGAAGCAGGGATTAAAGACGAGAGCACATTACGGAATCTGGGGGCGAAAATGAGCTGGCTGAGGCTTCGTCATCTCAAT
AAATCTCTGACGGTGAAAATTCTCTATTCTCTGGAAGGGGCGATTCTCGGGGTACATGAAGCCGCGCTCCCGGCGGTACG
CCGCCAGGAGCTTGCAGACTGGGTTCAGTCGCTTACGACAGAGCAGGGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

71.287

99.507

0.709