Detailed information NTG0800964

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: RHN94_RS00930
• Genome accession: NZ_CP133811
• Coordinates: 187619..188602 (+)
• Length: 327 a.a.
• NCBI ID: WP_001411576.1
• Uniprot ID: -
• Organism: Escherichia coli strain EC2001
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 182619..193602

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RHN94_RS00915 (RHN94_00905)	dppA	183919..185526 (+)	1608	WP_001222881.1	dipeptide ABC transporter substrate-binding protein DppA	-
RHN94_RS00920 (RHN94_00910)	dppB	185677..186696 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
RHN94_RS00925 (RHN94_00915)	dppC	186706..187608 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
RHN94_RS00930 (RHN94_00920)	amiE	187619..188602 (+)	984	WP_001411576.1	dipeptide ABC transporter ATP-binding protein	Regulator
RHN94_RS00935 (RHN94_00925)	dppF	188599..189603 (+)	1005	WP_000107017.1	dipeptide ABC transporter ATP-binding subunit DppF	-
RHN94_RS00940 (RHN94_00930)	yhjV	189633..190904 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
RHN94_RS00945 (RHN94_00935)	ldrD	191380..191487 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
RHN94_RS00950 (RHN94_00940)	bcsG	191574..193253 (-)	1680	WP_053275273.1	cellulose biosynthesis protein BcsG	-
RHN94_RS00955 (RHN94_00945)	bcsF	193250..193441 (-)	192	WP_109544692.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35874.39 Da
• Isoelectric Point: 6.5814

>NTDB_id=800964 RHN94_RS00930 WP_001411576.1 187619..188602(+) (amiE) [Escherichia coli strain EC2001]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DTGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=800964 RHN94_RS00930 WP_001411576.1 187619..188602(+) (amiE) [Escherichia coli strain EC2001]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCATTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGCTCCGGTAAGTCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTGATGGCGGAAAAGCTGGAGTTTAACGGCCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTGGTGGGGGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGATC
TGGCTCTGGTGGCGGAAGCTGCGCATAAAATCATTGTGATGTATGCCGGTCAAGTGGTGGAAACGGGCGATGCTCACGCC
ATCTTCCATGCGCCGCGTCATCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTTT
GGCGTCGTTACCTGGCGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATACCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	45.89	89.297	0.41
amiE	Streptococcus thermophilus LMG 18311	45.548	89.297	0.407
amiE	Streptococcus thermophilus LMD-9	45.548	89.297	0.407
oppD	Streptococcus mutans UA159	41.379	97.554	0.404