Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | L6486_RS09965 | Genome accession | NZ_AP022946 |
| Coordinates | 1935571..1935858 (+) | Length | 95 a.a. |
| NCBI ID | WP_000648324.1 | Uniprot ID | - |
| Organism | Bacillus cereus strain J10 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1930571..1940858
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6486_RS09945 (BCJMU10_1912) | - | 1931745..1931942 (+) | 198 | WP_001048104.1 | DUF4083 domain-containing protein | - |
| L6486_RS09950 (BCJMU10_1913) | - | 1931974..1932435 (+) | 462 | WP_000024992.1 | NUDIX hydrolase | - |
| L6486_RS09955 (BCJMU10_1914) | nadE | 1932485..1933303 (-) | 819 | WP_000174904.1 | ammonia-dependent NAD(+) synthetase | - |
| L6486_RS09960 (BCJMU10_1915) | - | 1933574..1935454 (+) | 1881 | WP_063219874.1 | ABC transporter permease | - |
| L6486_RS09965 (BCJMU10_1916) | abrB | 1935571..1935858 (+) | 288 | WP_000648324.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| L6486_RS09970 (BCJMU10_1917) | - | 1936134..1937081 (+) | 948 | WP_063219875.1 | serine protease | - |
| L6486_RS09975 (BCJMU10_1918) | - | 1937124..1937432 (-) | 309 | WP_001259906.1 | helix-turn-helix transcriptional regulator | - |
| L6486_RS09980 (BCJMU10_1919) | - | 1937539..1938474 (+) | 936 | WP_000877965.1 | aldo/keto reductase | - |
| L6486_RS09985 (BCJMU10_1920) | - | 1938522..1939697 (+) | 1176 | WP_048655667.1 | MFS transporter | - |
| L6486_RS29240 (BCJMU10_1921) | - | 1939746..1939952 (+) | 207 | WP_001101738.1 | hypothetical protein | - |
| L6486_RS09990 (BCJMU10_1922) | - | 1940096..1940458 (+) | 363 | WP_001198796.1 | DUF805 domain-containing protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10587.32 Da Isoelectric Point: 4.8408
>NTDB_id=80096 L6486_RS09965 WP_000648324.1 1935571..1935858(+) (abrB) [Bacillus cereus strain J10]
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEADKIILQKYQPYNACQITGDVSEQNISLANGNITVGIEGAE
YLVKEIEKFLNKSEV
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEADKIILQKYQPYNACQITGDVSEQNISLANGNITVGIEGAE
YLVKEIEKFLNKSEV
Nucleotide
Download Length: 288 bp
>NTDB_id=80096 L6486_RS09965 WP_000648324.1 1935571..1935858(+) (abrB) [Bacillus cereus strain J10]
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATCCCTAAAGAATTACGCGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTTGTAGAAGCAGATAAAATCATTTTACAAAAATATCAACCTTACAATGCTT
GCCAAATCACAGGTGATGTTTCAGAGCAGAACATATCATTAGCAAATGGAAATATTACTGTTGGGATAGAGGGAGCGGAA
TATTTAGTAAAAGAAATAGAAAAGTTTTTAAACAAGAGTGAGGTTTAG
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATCCCTAAAGAATTACGCGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTTGTAGAAGCAGATAAAATCATTTTACAAAAATATCAACCTTACAATGCTT
GCCAAATCACAGGTGATGTTTCAGAGCAGAACATATCATTAGCAAATGGAAATATTACTGTTGGGATAGAGGGAGCGGAA
TATTTAGTAAAAGAAATAGAAAAGTTTTTAAACAAGAGTGAGGTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
55.556 |
94.737 |
0.526 |