Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   L6486_RS06200 Genome accession   NZ_AP022946
Coordinates   1196276..1196452 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus cereus strain J10     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1191276..1201452
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L6486_RS06180 (BCJMU10_1140) clpC 1191607..1194207 (+) 2601 WP_236790026.1 ATP-dependent chaperone ClpB Regulator
  L6486_RS06185 (BCJMU10_1141) - 1194246..1194428 (-) 183 WP_001211116.1 YjzD family protein -
  L6486_RS06190 (BCJMU10_1142) - 1194585..1195319 (+) 735 WP_000028712.1 hydrolase -
  L6486_RS06195 (BCJMU10_1143) - 1195349..1196221 (+) 873 WP_063220264.1 NAD(P)-dependent oxidoreductase -
  L6486_RS06200 (BCJMU10_1144) comZ 1196276..1196452 (+) 177 WP_001986215.1 ComZ family protein Regulator
  L6486_RS06205 (BCJMU10_1145) fabH 1196841..1197773 (+) 933 WP_001100547.1 beta-ketoacyl-ACP synthase III -
  L6486_RS06210 (BCJMU10_1146) fabF 1197805..1199043 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  L6486_RS06215 (BCJMU10_1147) - 1199150..1199938 (+) 789 WP_000513277.1 DUF2268 domain-containing putative Zn-dependent protease -
  L6486_RS06220 (BCJMU10_1148) - 1200080..1200826 (+) 747 WP_000966127.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=80088 L6486_RS06200 WP_001986215.1 1196276..1196452(+) (comZ) [Bacillus cereus strain J10]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=80088 L6486_RS06200 WP_001986215.1 1196276..1196452(+) (comZ) [Bacillus cereus strain J10]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAGGCCTATGAGCTCGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment