Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   L6482_RS05960 Genome accession   NZ_AP022934
Coordinates   1172472..1172648 (+) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus cereus strain J7     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1167472..1177648
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L6482_RS05940 (BCJMU07_1087) clpB 1167809..1170409 (+) 2601 WP_000365382.1 ATP-dependent chaperone ClpB -
  L6482_RS05945 (BCJMU07_1088) - 1170443..1170625 (-) 183 WP_001211116.1 YjzD family protein -
  L6482_RS05950 (BCJMU07_1089) - 1170782..1171516 (+) 735 WP_000028701.1 hydrolase -
  L6482_RS05955 (BCJMU07_1090) - 1171546..1172418 (+) 873 WP_033668777.1 NAD(P)-dependent oxidoreductase -
  L6482_RS05960 (BCJMU07_1091) comZ 1172472..1172648 (+) 177 WP_009879752.1 ComZ family protein Regulator
  L6482_RS05965 (BCJMU07_1092) fabH 1172881..1173813 (+) 933 WP_236802428.1 beta-ketoacyl-ACP synthase III -
  L6482_RS05970 (BCJMU07_1093) fabF 1173845..1175083 (+) 1239 WP_200152365.1 beta-ketoacyl-ACP synthase II -
  L6482_RS05975 (BCJMU07_1094) - 1175190..1175978 (+) 789 WP_000513290.1 DUF2268 domain-containing putative Zn-dependent protease -
  L6482_RS05980 (BCJMU07_1095) - 1176119..1176865 (+) 747 WP_000966134.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=80039 L6482_RS05960 WP_009879752.1 1172472..1172648(+) (comZ) [Bacillus cereus strain J7]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=80039 L6482_RS05960 WP_009879752.1 1172472..1172648(+) (comZ) [Bacillus cereus strain J7]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCACTTGATATGGAAAAAGCTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment