Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | L6482_RS00220 | Genome accession | NZ_AP022934 |
| Coordinates | 40415..40699 (-) | Length | 94 a.a. |
| NCBI ID | WP_000843036.1 | Uniprot ID | A0A9W5VII1 |
| Organism | Bacillus cereus strain J7 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 35415..45699
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6482_RS00185 (BCJMU07_0025) | tmk | 35569..36195 (+) | 627 | WP_000677233.1 | dTMP kinase | - |
| L6482_RS00190 (BCJMU07_0026) | holB | 36231..37214 (+) | 984 | WP_200152498.1 | DNA polymerase III subunit delta' | - |
| L6482_RS00195 (BCJMU07_0027) | - | 37220..38047 (+) | 828 | WP_000272429.1 | stage 0 sporulation family protein | - |
| L6482_RS00200 (BCJMU07_0028) | yabA | 38062..38412 (+) | 351 | WP_000412056.1 | DNA replication initiation control protein YabA | - |
| L6482_RS00205 (BCJMU07_0029) | - | 38533..39273 (+) | 741 | WP_001055350.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| L6482_RS00210 (BCJMU07_0030) | - | 39260..39550 (+) | 291 | WP_000414341.1 | GIY-YIG nuclease family protein | - |
| L6482_RS00215 (BCJMU07_0031) | rsmI | 39519..40394 (+) | 876 | WP_000267810.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| L6482_RS00220 (BCJMU07_0032) | abrB | 40415..40699 (-) | 285 | WP_000843036.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| L6482_RS00225 (BCJMU07_0033) | metG | 41189..43171 (+) | 1983 | WP_000134147.1 | methionine--tRNA ligase | - |
| L6482_RS00230 (BCJMU07_0034) | - | 43337..44104 (+) | 768 | WP_000895823.1 | TatD family hydrolase | - |
| L6482_RS00235 (BCJMU07_0035) | rnmV | 44319..44876 (+) | 558 | WP_000692830.1 | ribonuclease M5 | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10490.17 Da Isoelectric Point: 4.7174
>NTDB_id=80028 L6482_RS00220 WP_000843036.1 40415..40699(-) (abrB) [Bacillus cereus strain J7]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=80028 L6482_RS00220 WP_000843036.1 40415..40699(-) (abrB) [Bacillus cereus strain J7]
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCACTTGAAATCTATGTTGATGACGAGAAAATCATCTTAAAAAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCACTTGAAATCTATGTTGATGACGAGAAAATCATCTTAAAAAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
85.106 |
100 |
0.851 |