Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   RGU80_RS05230 Genome accession   NZ_CP133706
Coordinates   1122378..1123319 (+) Length   313 a.a.
NCBI ID   WP_001210792.1    Uniprot ID   A0A077GHT6
Organism   Acinetobacter baumannii strain CRAb2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1117378..1128319
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RGU80_RS05220 (RGU80_05230) basA 1117798..1119645 (+) 1848 WP_000910269.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -
  RGU80_RS05225 (RGU80_05235) basB 1119716..1121746 (-) 2031 WP_002056945.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  RGU80_RS05230 (RGU80_05240) ceuB 1122378..1123319 (+) 942 WP_001210792.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  RGU80_RS05235 (RGU80_05245) bauC 1123319..1124266 (+) 948 WP_001223291.1 ferric acinetobactin ABC transporter permease subunit BauC -
  RGU80_RS05240 (RGU80_05250) bauE 1124263..1125033 (+) 771 WP_000582117.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  RGU80_RS05245 (RGU80_05255) bauB 1125040..1126008 (+) 969 WP_001104132.1 siderophore-binding periplasmic lipoprotein BauB -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33993.06 Da        Isoelectric Point: 8.6941

>NTDB_id=800246 RGU80_RS05230 WP_001210792.1 1122378..1123319(+) (ceuB) [Acinetobacter baumannii strain CRAb2]
MRFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLVCDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=800246 RGU80_RS05230 WP_001210792.1 1122378..1123319(+) (ceuB) [Acinetobacter baumannii strain CRAb2]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCATTATTGCTCGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTAATTACTATTGTGCTCA
CCGGTATTGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAATAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCTTTAACTTTAGTTCCGGTAACCAGCACGCTGAGTAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATCCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTTATTGGCTTGATGTATGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGTCATTATGAAGTCATTTACATTATTTTTCCGAT
TGTTGTTCTGACTTATCTTTTCGCACACCGCTTTACCGTGATTGGTATGGGTGAAGAGATGGCTTCTAGCTTAGGACTTA
GTTATGCAGCTATAGCCGCCATTGGTTTAATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACTGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAGAACTTAGCTAAAACCTTGCCCATTGTGGC
TTTGGGTGGAGCGTCTCTATTACTGGTTTGCGACATTCTTGGTCGTTCAATTATTTATCCATTTGAAGTGCCAATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A077GHT6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.595

94.569

0.422