Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   PX690_RS21120 Genome accession   NZ_CP119675
Coordinates   4179466..4179630 (-) Length   54 a.a.
NCBI ID   WP_269195014.1    Uniprot ID   -
Organism   Bacillus velezensis strain 160     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 4174466..4184630
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PX690_RS21115 (PX690_21115) - 4174847..4179544 (-) 4698 WP_276123599.1 non-ribosomal peptide synthetase -
  PX690_RS21120 (PX690_21120) comS 4179466..4179630 (-) 165 WP_269195014.1 competence protein ComS Regulator
  PX690_RS21125 (PX690_21125) srfAB 4179695..4182739 (-) 3045 Protein_4173 surfactin non-ribosomal peptide synthetase SrfAB -
  PX690_RS21130 (PX690_21130) - 4182761..4184125 (-) 1365 WP_076983495.1 condensation domain-containing protein -

Sequence


Protein


Download         Length: 54 a.a.        Molecular weight: 6238.22 Da        Isoelectric Point: 11.7559

>NTDB_id=800229 PX690_RS21120 WP_269195014.1 4179466..4179630(-) (comS) [Bacillus velezensis strain 160]
MRARRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=800229 PX690_RS21120 WP_269195014.1 4179466..4179630(-) (comS) [Bacillus velezensis strain 160]
ATGAGAGCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains


Predicted by InterproScan.

(9-52)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5