Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | OO862_RS19050 | Genome accession | NZ_AP026099 |
| Coordinates | 3692680..3693195 (-) | Length | 171 a.a. |
| NCBI ID | WP_001130215.1 | Uniprot ID | B5Z2A2 |
| Organism | Escherichia coli strain 61_150228 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3687680..3698195
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO862_RS19025 (CL8NIID61_36560) | ygaZ | 3688079..3688816 (+) | 738 | WP_000445658.1 | L-valine exporter subunit YgaZ | - |
| OO862_RS19030 (CL8NIID61_36570) | ygaH | 3688806..3689141 (+) | 336 | WP_000119747.1 | L-valine transporter subunit YgaH | - |
| OO862_RS19035 (CL8NIID61_36580) | emrR | 3689232..3689762 (+) | 531 | WP_000378442.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| OO862_RS19040 (CL8NIID61_36590) | emrA | 3689889..3691061 (+) | 1173 | WP_001302673.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| OO862_RS19045 (CL8NIID61_36600) | emrB | 3691078..3692616 (+) | 1539 | WP_001295176.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| OO862_RS19050 (CL8NIID61_36610) | luxS | 3692680..3693195 (-) | 516 | WP_001130215.1 | S-ribosylhomocysteine lyase | Regulator |
| OO862_RS19055 (CL8NIID61_36620) | gshA | 3693345..3694901 (-) | 1557 | WP_000611787.1 | glutamate--cysteine ligase | - |
| OO862_RS19060 (CL8NIID61_36630) | yqaA | 3694974..3695402 (-) | 429 | WP_001287450.1 | YqaA family protein | - |
| OO862_RS19065 (CL8NIID61_36640) | yqaB | 3695399..3695965 (-) | 567 | WP_000273311.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| OO862_RS19095 (CL8NIID61_36650) | csrA | 3697193..3697378 (-) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19444.24 Da Isoelectric Point: 5.0362
>NTDB_id=80022 OO862_RS19050 WP_001130215.1 3692680..3693195(-) (luxS) [Escherichia coli strain 61_150228]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADVWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPKEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADVWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPKEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=80022 OO862_RS19050 WP_001130215.1 3692680..3693195(-) (luxS) [Escherichia coli strain 61_150228]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGTCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATTCCGGAGCTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGTCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATTCCGGAGCTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
72.515 |
100 |
0.725 |