Detailed information NTG0800217

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: PX690_RS16835
• Genome accession: NZ_CP119675
• Coordinates: 3358148..3359296 (+)
• Length: 382 a.a.
• NCBI ID: WP_003156336.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain 160
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3353148..3364296

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PX690_RS16815 (PX690_16815)	-	3353545..3354228 (-)	684	WP_003156346.1	ABC transporter ATP-binding protein	-
PX690_RS16820 (PX690_16820)	-	3354243..3355679 (-)	1437	WP_003156344.1	ABC transporter permease	-
PX690_RS16825 (PX690_16825)	-	3355892..3356575 (+)	684	WP_003156341.1	response regulator transcription factor	-
PX690_RS16830 (PX690_16830)	-	3356562..3357995 (+)	1434	WP_162130794.1	HAMP domain-containing sensor histidine kinase	-
PX690_RS16835 (PX690_16835)	rapC	3358148..3359296 (+)	1149	WP_003156336.1	Rap family tetratricopeptide repeat protein	Regulator
PX690_RS16840 (PX690_16840)	phrC	3359280..3359399 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
PX690_RS16845 (PX690_16845)	-	3359549..3359644 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
PX690_RS16850 (PX690_16850)	-	3359739..3361103 (-)	1365	WP_014304341.1	aspartate kinase	-
PX690_RS16855 (PX690_16855)	ceuB	3361518..3362471 (+)	954	WP_003156332.1	ABC transporter permease	Machinery gene
PX690_RS16860 (PX690_16860)	-	3362461..3363408 (+)	948	WP_003156331.1	iron chelate uptake ABC transporter family permease subunit	-
PX690_RS16865 (PX690_16865)	-	3363402..3364160 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45521.82 Da
• Isoelectric Point: 5.0732

>NTDB_id=800217 PX690_RS16835 WP_003156336.1 3358148..3359296(+) (rapC) [Bacillus velezensis strain 160]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=800217 PX690_RS16835 WP_003156336.1 3358148..3359296(+) (rapC) [Bacillus velezensis strain 160]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACGTATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCAGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTTTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
CCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568