Detailed information NTG0800198

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: PX690_RS12970
• Genome accession: NZ_CP119675
• Coordinates: 2466696..2467832 (-)
• Length: 378 a.a.
• NCBI ID: WP_106503125.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain 160
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2461696..2472832

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PX690_RS12930 (PX690_12930)	-	2462233..2462451 (+)	219	WP_014417667.1	helix-turn-helix transcriptional regulator	-
PX690_RS12935 (PX690_12935)	-	2462499..2462780 (+)	282	WP_014417668.1	hypothetical protein	-
PX690_RS12940 (PX690_12940)	-	2462832..2463077 (-)	246	WP_041481754.1	helix-turn-helix domain-containing protein	-
PX690_RS12945 (PX690_12945)	-	2463578..2464294 (+)	717	WP_276123157.1	hypothetical protein	-
PX690_RS12950 (PX690_12950)	-	2464330..2464638 (-)	309	WP_014417670.1	hypothetical protein	-
PX690_RS12955 (PX690_12955)	-	2464651..2466075 (-)	1425	WP_276123158.1	lipase	-
PX690_RS12960 (PX690_12960)	-	2466125..2466490 (+)	366	WP_014417672.1	DUF1433 domain-containing protein	-
PX690_RS12965 (PX690_12965)	-	2466533..2466706 (-)	174	WP_169061491.1	hypothetical protein	-
PX690_RS12970 (PX690_12970)	rapC	2466696..2467832 (-)	1137	WP_106503125.1	RapH N-terminal domain-containing protein	Regulator
PX690_RS12975 (PX690_12975)	-	2468013..2468843 (-)	831	WP_014417674.1	SHOCT domain-containing protein	-
PX690_RS12980 (PX690_12980)	-	2469008..2469937 (-)	930	WP_106503124.1	SH3 domain-containing protein	-
PX690_RS12985 (PX690_12985)	-	2470028..2472667 (-)	2640	WP_276123159.1	phage tail protein	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 44579.90 Da
• Isoelectric Point: 4.9328

>NTDB_id=800198 PX690_RS12970 WP_106503125.1 2466696..2467832(-) (rapC) [Bacillus velezensis strain 160]
MKQLISSSKVGVKINEWYKYIRMFSVPDAEVLKSEVEQEINAMEENQDLLLYYSLMCFRHQLMLDYLEPKTMNEERPEIS
DLLEKIESSQAKLKGILEYYFNFFRGMYEFEEYEYLKAISFYKQAEKKLSLVADEIERAEFHYKVAEIYYHMKQTHMSMH
HIVQAIESYRAHETYSVREIQCSFVIGLNYLDMEYPEKAIPHFQKAYKKALEIDMPRLAGSALYNLGISSFSEEKFDEAI
EYFKEGVLIYEQNGYEHANRLLDILFMLAKTNFKVNKKTDGTAAYKHGLSLAKNLNDEVLTKMFDSLNALYIDDNKETLN
EILAYLEFKTMFSDVEDLATDAAKYYTKNEDHKAAGLFYEKVLYAQKQIQRGDCLYEI

Nucleotide

• Length: 1137 bp

>NTDB_id=800198 PX690_RS12970 WP_106503125.1 2466696..2467832(-) (rapC) [Bacillus velezensis strain 160]
TTGAAACAGTTAATCTCCTCATCCAAAGTCGGCGTGAAGATTAATGAGTGGTACAAGTATATTCGCATGTTTAGTGTTCC
TGATGCAGAGGTGCTGAAATCAGAAGTGGAACAAGAAATAAACGCTATGGAAGAAAATCAGGATTTATTGTTGTACTATT
CCCTCATGTGTTTTAGACATCAATTAATGCTTGATTATCTTGAACCAAAAACCATGAATGAAGAACGACCTGAGATTTCA
GACTTATTAGAAAAGATCGAAAGTAGCCAAGCTAAATTGAAAGGAATTCTTGAATATTACTTTAACTTTTTCCGTGGGAT
GTATGAATTTGAAGAATACGAATATCTTAAAGCGATAAGTTTTTACAAACAAGCGGAAAAGAAGTTGTCACTTGTAGCCG
ACGAAATTGAGCGAGCGGAGTTTCATTACAAAGTCGCTGAAATTTATTATCACATGAAACAAACACACATGTCGATGCAC
CATATTGTTCAAGCAATCGAAAGCTACAGAGCGCATGAAACCTATTCTGTTAGAGAAATTCAATGTTCTTTTGTTATTGG
TCTAAATTATTTAGATATGGAGTACCCAGAAAAGGCTATCCCTCATTTTCAAAAAGCTTATAAAAAAGCACTTGAAATTG
ATATGCCAAGATTAGCCGGATCCGCTCTATATAATTTAGGGATTTCCTCTTTTTCTGAAGAAAAGTTCGACGAGGCTATT
GAGTATTTCAAAGAAGGAGTATTGATCTATGAGCAGAACGGATATGAACATGCTAACCGCTTATTAGACATTCTTTTCAT
GTTAGCGAAAACGAACTTTAAGGTAAATAAGAAAACTGACGGAACAGCTGCTTATAAACATGGACTGTCATTGGCTAAAA
ACTTAAATGATGAAGTATTAACCAAAATGTTTGATTCCCTGAATGCCCTTTACATTGACGATAACAAAGAAACACTAAAT
GAGATTCTTGCTTATTTAGAATTTAAAACAATGTTTTCAGATGTGGAGGACTTAGCAACCGACGCAGCGAAGTATTATAC
AAAAAATGAAGACCATAAAGCGGCTGGATTATTTTATGAGAAAGTGCTTTATGCCCAAAAACAAATCCAGAGAGGGGATT
GTCTTTATGAAATTTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_8) (222-252)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	48.148	100	0.481
rapF	Bacillus subtilis subsp. subtilis str. 168	44.882	100	0.452