Detailed information NTG0800188

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: PX690_RS09620
• Genome accession: NZ_CP119675
• Coordinates: 1786752..1787897 (+)
• Length: 381 a.a.
• NCBI ID: WP_024085922.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain 160
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1781752..1792897

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PX690_RS09600 (PX690_09600)	-	1782226..1782942 (-)	717	WP_014306017.1	Crp/Fnr family transcriptional regulator	-
PX690_RS09605 (PX690_09605)	narK	1783040..1784230 (-)	1191	WP_095315495.1	nitrate transporter NarK	-
PX690_RS09610 (PX690_09610)	argS	1784365..1786035 (-)	1671	WP_025853601.1	arginine--tRNA ligase	-
PX690_RS09615 (PX690_09615)	-	1786032..1786460 (-)	429	WP_003151069.1	DUF1934 family protein	-
PX690_RS09620 (PX690_09620)	rapF	1786752..1787897 (+)	1146	WP_024085922.1	Rap family tetratricopeptide repeat protein	Regulator
PX690_RS09625 (PX690_09625)	-	1787881..1788000 (+)	120	WP_131242041.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
PX690_RS09630 (PX690_09630)	speB	1788123..1788995 (-)	873	WP_003151054.1	agmatinase	-
PX690_RS09635 (PX690_09635)	speE	1789055..1789885 (-)	831	WP_003151052.1	spermidine synthase	-
PX690_RS09640 (PX690_09640)	-	1790085..1792157 (+)	2073	WP_276123557.1	transglycosylase domain-containing protein	-
PX690_RS09645 (PX690_09645)	-	1792181..1792612 (-)	432	WP_014306024.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45768.27 Da
• Isoelectric Point: 5.0694

>NTDB_id=800188 PX690_RS09620 WP_024085922.1 1786752..1787897(+) (rapF) [Bacillus velezensis strain 160]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=800188 PX690_RS09620 WP_024085922.1 1786752..1787897(+) (rapF) [Bacillus velezensis strain 160]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGATGACCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTACGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACGCAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533