Detailed information NTG0800147

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: P3K65_RS25755
• Genome accession: NZ_CP119629
• Coordinates: 4981744..4983093 (-)
• Length: 449 a.a.
• NCBI ID: WP_000879439.1
• Uniprot ID: -
• Organism: Bacillus paranthracis strain Bc006
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4976744..4988093

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P3K65_RS25735 (P3K65_25735)	secA	4977068..4979575 (-)	2508	WP_000579382.1	preprotein translocase subunit SecA	-
P3K65_RS25740 (P3K65_25740)	hpf	4979850..4980392 (-)	543	WP_000671190.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
P3K65_RS25745 (P3K65_25745)	cspC	4980716..4980913 (-)	198	WP_001162041.1	cold shock protein CspC	-
P3K65_RS25750 (P3K65_25750)	-	4981040..4981744 (-)	705	WP_001998620.1	ComF family protein	-
P3K65_RS25755 (P3K65_25755)	comFA	4981744..4983093 (-)	1350	WP_000879439.1	ATP-dependent helicase ComFA	Machinery gene
P3K65_RS25760 (P3K65_25760)	-	4983220..4984665 (-)	1446	WP_000499501.1	NlpC/P60 family protein	-
P3K65_RS25765 (P3K65_25765)	-	4984813..4985127 (-)	315	WP_000400857.1	winged helix-turn-helix transcriptional regulator	-
P3K65_RS25770 (P3K65_25770)	-	4985301..4986143 (-)	843	WP_000844764.1	DegV family protein	-
P3K65_RS25775 (P3K65_25775)	-	4986383..4987018 (+)	636	WP_000926683.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51069.57 Da
• Isoelectric Point: 9.7406

>NTDB_id=800147 P3K65_RS25755 WP_000879439.1 4981744..4983093(-) (comFA) [Bacillus paranthracis strain Bc006]
MLAGKQLLLEELSSDLRRELSDLKKKGEVVCVQGITKNTSKYICQRCGNIEQRLFASFLCKRCGKACAYCRKCITMGRVS
ECTVLVRGIHERNGDRELNPLQWNGALSIGQELAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELAPRLQEVFPSITVAALYGGSVDHKKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVRQAM
KEKAARIYLTATPDEKWKRNFRRGKQKGIIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMNLNKKYPIFL
FVPHVRYIEEISQLLKGLDNRIDGVHAEDSMRKEKVASFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVMYFHYGKTEAMVRAKKHIQSMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=800147 P3K65_RS25755 WP_000879439.1 4981744..4983093(-) (comFA) [Bacillus paranthracis strain Bc006]
ATGCTTGCTGGAAAACAGTTGCTATTAGAAGAACTCTCTTCAGATTTACGGAGAGAATTAAGTGATTTGAAAAAGAAGGG
AGAGGTTGTATGTGTACAAGGTATAACAAAGAATACTTCTAAATATATATGTCAGCGCTGCGGAAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCGGTAAAGCATGTGCGTATTGCCGGAAGTGTATCACGATGGGGAGAGTTAGC
GAATGTACTGTACTTGTTCGCGGGATTCATGAAAGAAACGGAGACAGGGAGCTAAATCCATTACAGTGGAATGGGGCTTT
ATCGATTGGTCAGGAGTTGGCGGCGCAAGGAGTTATAGAAGCGATTAAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCGCTCCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGGACTGACGTTGTACTGGAATTAGCGCCGAGATTACAAGAAGTGTTTCCAAGTATAACTGTAGCTGCTTTATACGG
AGGGAGTGTAGATCATAAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCGTTTC
ATGTGATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCAGATCAAATGTTACAGTATGCAGTTAGGCAAGCAATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAGTGGAAGCGTAATTTCAGAAGAGGGAAACAAAA
AGGTATCATTGTTTCGGGAAGATACCATCGTCACCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGTGTGTTACTACAATGGTTAAAAATGAACTTAAACAAAAAGTATCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATAAGTCAGTTGTTGAAAGGGTTGGATAATAGAATCGATGGCGTGCATGC
AGAAGATTCGATGAGAAAAGAAAAAGTAGCATCTTTCAGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGAGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGAGCTGAAGAAGAAATTTTTTCAGAGAGTGCGCTCGTA
CAAATTGCAGGCCGAGCGGGGCGTAGTTTTGAAGAGCCATATGGTGAGGTTATGTATTTTCATTACGGTAAGACAGAGGC
AATGGTACGCGCGAAAAAACATATTCAAAGTATGAACAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (110-254)

• Helicase conserved C-terminal domain (Helicase_C) (311-408)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.392	93.096	0.488
comFA	Latilactobacillus sakei subsp. sakei 23K	40	90.2	0.361